RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 UEVLDQ8IX04 471 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 ZNF540Q8NDQ6 660 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 NEU4Q8WWR8 484 aaPredicted RBP12.64□□□□□ -0.39
IRF3-223ENST00000599223 RCN3Q96D15 328 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 TXNDC15Q96J42 360 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 ANKRD27Q96NW4 1050 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 SLC52A3Q9NQ40 469 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 GID8Q9NWU2 228 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 VAPAQ9P0L0 249 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 MYEF2Q9P2K5 600 aaKnown RBP12.64□□□□□ -0.39
IRF3-223ENST00000599223 USP22Q9UPT9 525 aa12.64□□□□□ -0.39
IRF3-223ENST00000599223 C5orf58C9J3I9 102 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 GSC2O15499 205 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 OR2T1O43869 369 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 CD79AP11912 226 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 ZNF35P13682 527 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 NR4A1P22736 598 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 AQP1P29972 269 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 CDK6Q00534 326 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 PIGFQ07326 219 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 MFSD13AQ14CX5 517 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 MAD2L1BPQ15013 274 aaPredicted RBP12.63□□□□□ -0.39
IRF3-223ENST00000599223 COQ5Q5HYK3 327 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 ELFN2Q5R3F8 820 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 C5orf46Q6UWT4 87 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 LRP11Q86VZ4 500 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 UBASH3BQ8TF42 649 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 DNAJA4Q8WW22 397 aaPredicted RBP12.63□□□□□ -0.39
IRF3-223ENST00000599223 HPS1Q92902 700 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 MRPL24Q96A35 216 aaKnown RBP12.63□□□□□ -0.39
IRF3-223ENST00000599223 SYT3Q9BQG1 590 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 THTPAQ9BU02 230 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 RAD21L1Q9H4I0 556 aa12.63□□□□□ -0.39
IRF3-223ENST00000599223 TESQ9UGI8 421 aaKnown RBP12.63□□□□□ -0.39
IRF3-223ENST00000599223 PRPF19Q9UMS4 504 aaKnown RBP12.63□□□□□ -0.39
IRF3-223ENST00000599223 HAX1O00165 279 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 MRASO14807 208 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 WNT9BO14905 357 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 AKAP8O43823 692 aaKnown RBP12.62□□□□□ -0.39
IRF3-223ENST00000599223 SERPINI2O75830 405 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 NCR1O76036 304 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 HPXP02790 462 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 IFNGR1P15260 489 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 ITGA2P17301 1181 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 ALDH3B1P43353 468 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 RGS8P57771 180 aaPredicted RBP12.62□□□□□ -0.39
IRF3-223ENST00000599223 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 GSG1Q2KHT4 349 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 REP15Q6BDI9 236 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 REEP3Q6NUK4 255 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 ULK3Q6PHR2 472 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 ZNF813Q6ZN06 617 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 ZNF584Q8IVC4 421 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 DEFB107AQ8IZN7 70 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 SCAIQ8N9R8 606 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 FGFBP3Q8TAT2 258 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 CADM1Q9BY67 442 aaKnown RBP12.62□□□□□ -0.39
IRF3-223ENST00000599223 LEF1Q9UJU2 399 aaPredicted RBP12.62□□□□□ -0.39
IRF3-223ENST00000599223 FZR1Q9UM11 496 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 CMAHPQ9Y471 501 aa12.62□□□□□ -0.39
IRF3-223ENST00000599223 M0R233 179 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 M0R3H8 397 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 C8BP07358 591 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 ERCC1P07992 297 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 PATE4P0C8F1 98 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 TCN1P20061 433 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 GIPRP48546 466 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 PTDSS1P48651 473 aaKnown RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 CDH12P55289 794 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 PUDPQ08623 228 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 SCARB2Q14108 478 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 OR1Q1Q15612 314 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 FXNQ16595 210 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 HACD2Q6Y1H2 254 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 NET1Q7Z628 596 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 TSPYL5Q86VY4 417 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 PGAM4Q8N0Y7 254 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 RNF217Q8TC41 542 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 SLC47A1Q96FL8 570 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 CPPED1Q9BRF8 314 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 ULBP2Q9BZM5 246 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 NARFLQ9H6Q4 476 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 MRPL39Q9NYK5 338 aaKnown RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 TMEFF2Q9UIK5 374 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 FBXO9Q9UK97 447 aaPredicted RBP12.61□□□□□ -0.39
IRF3-223ENST00000599223 CORINQ9Y5Q5 1042 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 GMEB1Q9Y692 573 aa12.61□□□□□ -0.39
IRF3-223ENST00000599223 PLPP3O14495 311 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 SYNGR3O43761 229 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 NPPAP01160 153 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 PMS2P3Q13401 168 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 NPTX1Q15818 432 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 CCDC36Q8IYA8 594 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
IRF3-223ENST00000599223 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms