RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KNTC1P50748 2209 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 EML6Q6ZMW3 1958 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 A0A1W2PQ72 361 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 C9orf172C9J069 976 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 LOC110117498-PIK3R3F6TDL0 507 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 TP53I11O14683 189 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 SNX4O95219 450 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 OPN1LWP04000 364 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 OTX2P32243 289 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 MTNR1BP49286 362 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 HSF2Q03933 536 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 PUDPQ08623 228 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 ACSM3Q53FZ2 586 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 PXKQ7Z7A4 578 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 FADS6Q8N9I5 356 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 DDIT4LQ96D03 193 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 NXPE2Q96DL1 559 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 SPRY4Q9C004 299 aa15.32■□□□□ 0.04
SHKBP1-216ENST00000598201 LIPT2A6NK58 231 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 JMJD7P0C870 316 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 CCL3P10147 92 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 EDNRAP25101 427 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 RPS11P62280 158 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 TRAM1Q15629 374 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 ZNF79Q15937 498 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 OPN5Q6U736 354 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 H1FNTQ75WM6 255 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 SLC22A16Q86VW1 577 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 ADAD1Q96M93 576 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 FRMD6Q96NE9 622 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 PDCD1LG2Q9BQ51 273 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 TMEM185BQ9H7F4 350 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 VSX1Q9NZR4 365 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 B9D1Q9UPM9 204 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 A0A087WV48 116 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 TRBV2A0A0J9YWF9 115 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 OR8G3PP0DMU2 310 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 NANOS3P60323 173 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 Q0VFX4 171 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 ETFDHQ16134 617 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 RPL22L1Q6P5R6 122 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 DPY19L4Q7Z388 723 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 RPS19BP1Q86WX3 136 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 OR6N2Q8NGY6 317 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 AP3S1Q92572 193 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 PPP1R14BQ96C90 147 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 LIN37Q96GY3 246 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 ZPBPQ9BS86 351 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 TSPAN10Q9H1Z9 355 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 PROK2Q9HC23 129 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 C14orf119Q9NWQ9 140 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 FOXJ2Q9P0K8 574 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 COMMD3Q9UBI1 195 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 MRM2Q9UI43 246 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 ING1Q9UK53 422 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 UGT2A1Q9Y4X1 527 aa15.31■□□□□ 0.04
SHKBP1-216ENST00000598201 SLC22A23A1A5C7 686 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 SLC16A7O60669 478 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 PFDN1O60925 122 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 CTLA4P16410 223 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 SSR4P51571 173 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 MLF1P58340 268 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 ZP4Q12836 540 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 FOXC1Q12948 553 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 MYBPHQ13203 477 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 DDI2Q5TDH0 399 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 ZNF468Q5VIY5 522 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 MS4A15Q8N5U1 240 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 OR4K17Q8NGC6 315 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 HSD17B8Q92506 261 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 DDA1Q9BW61 102 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 POTEKPQ9BYX7 375 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 CHST11Q9NPF2 352 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 FKBP7Q9Y680 259 aa15.3■□□□□ 0.04
SHKBP1-216ENST00000598201 IGLV1-36A0A0B4J1U3 117 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 A0A1W2PPK0 400 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 TRIM3O75382 744 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 ABHD16AO95870 558 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 IGHEP01854 428 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 IFNGR1P15260 489 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 OR10A3P58181 314 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 TLE3Q04726 772 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 SNTA1Q13424 505 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 MFSD13AQ14CX5 517 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 CCDC58Q4VC31 144 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 MRPL48Q96GC5 212 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 SNX18Q96RF0 628 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 UBL7Q96S82 380 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 INTS14Q96SY0 518 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 AMELYQ99218 206 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 SH2D2AQ9NP31 389 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 TRAPPC4Q9Y296 219 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 PCSK5Q92824 1860 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 PTPRBP23467 1997 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 FREM2Q5SZK8 3169 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 MED12Q93074 2177 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 CCDC187A0A096LP49 1063 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 ISPDA4D126 451 aa15.29■□□□□ 0.04
SHKBP1-216ENST00000598201 G3V3Y1 287 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms