RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 DYDC1Q8WWB3 177 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 MS4A3Q96HJ5 214 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 SYT3Q9BQG1 590 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 TMEM43Q9BTV4 400 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 EMC6Q9BV81 110 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 PAIP1Q9H074 479 aaKnown RBP14.62□□□□□ -0.07
PNKP-210ENST00000597965 C1orf198Q9H425 327 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 DUSP13Q9UII6 198 aa14.62□□□□□ -0.07
PNKP-210ENST00000597965 FARS2O95363 451 aaKnown RBP14.61□□□□□ -0.07
PNKP-210ENST00000597965 PTHP01270 115 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 SERPINA5P05154 406 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 ARAFP10398 606 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 CFPP27918 469 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 ALDH3B1P43353 468 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 CSNK1A1P48729 337 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 ACTG1P63261 375 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 MYBPC1Q00872 1141 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 TEKQ02763 1124 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 FXNQ16595 210 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 MOGQ16653 247 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 PCGF3Q3KNV8 242 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 GLIPR1L2Q4G1C9 344 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 PHYHD1Q5SRE7 291 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 USP43Q70EL4 1123 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.61□□□□□ -0.07
PNKP-210ENST00000597965 CLDND2Q8NHS1 167 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 SNX33Q8WV41 574 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 ZNF75AQ96N20 296 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 RACGAP1Q9H0H5 632 aa14.61□□□□□ -0.07
PNKP-210ENST00000597965 A0A0B4J2E0 115 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 A0A1B0GX12 115 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 TRIM77I1YAP6 450 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 PLPP3O14495 311 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 NDUFAB1O14561 156 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 PPIHO43447 177 aaKnown RBP14.6□□□□□ -0.07
PNKP-210ENST00000597965 HPRP00739 348 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 HPXP02790 462 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 MT-ND5P03915 603 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 OR8G3PP0DMU2 310 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 GAAP10253 952 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 HLA-DOBP13765 273 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 OR1Q1Q15612 314 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 NKPD1Q17RQ9 610 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 LRIF1Q5T3J3 769 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 RGS7BPQ6MZT1 257 aaPredicted RBP14.6□□□□□ -0.07
PNKP-210ENST00000597965 SLC2A7Q6PXP3 512 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 OR9I1Q8NGQ6 314 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 OR5J2Q8NH18 312 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 NFKBIDQ8NI38 313 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 LRRC37BQ96QE4 947 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 TMEM38AQ9H6F2 299 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 SLC52A3Q9NQ40 469 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 ZNF275Q9NSD4 429 aaPredicted RBP14.6□□□□□ -0.07
PNKP-210ENST00000597965 MED29Q9NX70 200 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 SLCO1C1Q9NYB5 712 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 GMEB1Q9Y692 573 aa14.6□□□□□ -0.07
PNKP-210ENST00000597965 EVPLLA8MZ36 301 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 MGRN1O60291 552 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 PNPP00491 289 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 BGLAPP02818 100 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 ADORA3P0DMS8 318 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 TCN1P20061 433 aaPredicted RBP14.59□□□□□ -0.07
PNKP-210ENST00000597965 COL8A2P25067 703 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 MRPL19P49406 292 aaKnown RBP14.59□□□□□ -0.07
PNKP-210ENST00000597965 COMPP49747 757 aaPredicted RBP14.59□□□□□ -0.07
PNKP-210ENST00000597965 AQP5P55064 265 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 FAHD2BQ6P2I3 314 aaPredicted RBP14.59□□□□□ -0.07
PNKP-210ENST00000597965 TMEM154Q6P9G4 183 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 ARMC8Q8IUR7 673 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 OR6X1Q8NH79 312 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 SGMS2Q8NHU3 365 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 GCDHQ92947 438 aaPredicted RBP14.59□□□□□ -0.07
PNKP-210ENST00000597965 RAB39BQ96DA2 213 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 FAHD2AQ96GK7 314 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 TXNDC15Q96J42 360 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 OR52B2Q96RD2 323 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 LRMDAQ9H2I8 198 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 NARFLQ9H6Q4 476 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 PCDHB10Q9UN67 800 aa14.59□□□□□ -0.07
PNKP-210ENST00000597965 FMO6PO60774 539 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 VENTXO95231 258 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 TGDSO95455 350 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 RAD52P43351 418 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 LIMS1P48059 325 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 KLF3P57682 345 aaPredicted RBP14.58□□□□□ -0.08
PNKP-210ENST00000597965 SCARB2Q14108 478 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 RAB39AQ14964 217 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 ZSCAN26Q16670 478 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 SLC36A2Q495M3 483 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 NRN1LQ496H8 165 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 ACSM5Q6NUN0 579 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 TMEM53Q6P2H8 277 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 ZNF613Q6PF04 617 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 PIGWQ7Z7B1 504 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 CPLX4Q7Z7G2 160 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 SLC22A24Q8N4F4 322 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 C3orf56Q8N813 242 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 SLC30A7Q8NEW0 376 aa14.58□□□□□ -0.08
PNKP-210ENST00000597965 OR1J2Q8NGS2 313 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms