RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 KATNB1Q9BVA0 655 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 SLC17A5Q9NRA2 495 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 RASSF1Q9NS23 344 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 CCM2LQ9NUG4 571 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 GLTPQ9NZD2 209 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF346Q9UL40 294 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 POFUT2Q9Y2G5 429 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 AMDHD2Q9Y303 409 aa17.26■□□□□ 0.35
SHKBP1-214ENST00000597396 A0A1W2PR80 420 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 FAM221AA4D161 298 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 DEFB108AA8MXU0 73 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 KLF4O43474 513 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 PTP4A3O75365 173 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 TRMUO75648 421 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 IGHMP01871 453 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 HRGP04196 525 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 CD14P08571 375 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 PGA4P0DJD7 388 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 PGA3P0DJD8 388 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 FPR3P25089 353 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 ACVR1BP36896 505 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 ERVK-25P63136 954 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 ARF1P84077 181 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 GK3PQ14409 553 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 HIKESHIQ53FT3 197 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 ARMC4Q5T2S8 1044 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 C1orf94Q6P1W5 598 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 FANK1Q8TC84 345 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 GPA33Q99795 319 aa17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 CLEC4MQ9H2X3 399 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-214ENST00000597396 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF99A8MXY4 864 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 CENPBD1B2RD01 187 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 SIAH2O43255 324 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 E2F6O75461 281 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 GSSP48637 474 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 UBE2NP61088 152 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 RUNX1T1Q06455 604 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 TSPAN31Q12999 210 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 MICAQ29983 383 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 TBRG1Q3YBR2 411 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 FAM205BPQ63HN1 556 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 ANKRD16Q6P6B7 361 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 SMARCD3Q6STE5 483 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 SYT14Q8NB59 555 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 PAPD5Q8NDF8 572 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 BCL2L2Q92843 193 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 UTP4Q969X6 686 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 SLCO4A1Q96BD0 722 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF837Q96EG3 531 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 PLPPR2Q96GM1 343 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 TSPAN32Q96QS1 320 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 GRHPRQ9UBQ7 328 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 SLC25A15Q9Y619 301 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 DCHS2Q6V1P9 2916 aa17.24■□□□□ 0.35
SHKBP1-214ENST00000597396 APCP25054 2843 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 A0A096LPE4 126 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 A0A1W2PPZ6 126 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 A6NIZ1 184 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 SEC14L2O76054 403 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 WNT11O96014 354 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 QDPRP09417 244 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 NR2C1P13056 603 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF26P17031 533 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 NR1H2P55055 460 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 RAP1BP61224 184 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 RAP1AP62834 184 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 MYBPC1Q00872 1141 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 CD47Q08722 323 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 CCNIQ14094 377 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 WDR31Q8NA23 367 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 AQP11Q8NBQ7 271 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 OR10G2Q8NGC3 310 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 GIPC3Q8TF64 312 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 HDAC2Q92769 488 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF570Q96NI8 536 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 OR52D1Q9H346 318 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 ESRP2Q9H6T0 727 aaKnown RBP17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 DNAJB9Q9UBS3 223 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 IL20RAQ9UHF4 553 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 ADAM18Q9Y3Q7 739 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 MAGED1Q9Y5V3 778 aaPredicted RBP17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 CADP27708 2225 aa17.23■□□□□ 0.35
SHKBP1-214ENST00000597396 XKRYO14609 159 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 DHHO43323 396 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 DEAF1O75398 565 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 TIPRLO75663 272 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 SLC6A6P31641 620 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 IST1P53990 364 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 KRTAP10-9P60411 292 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 C1QTNF12Q5T7M4 302 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 THSD4Q6ZMP0 1018 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF813Q6ZN06 617 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 ARIH2OSQ8N7S6 290 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF519Q8TB69 540 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 MAGEE2Q8TD90 523 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 BOD1Q96IK1 185 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 Q96M85 177 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 GPX7Q96SL4 187 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 FOXB1Q99853 325 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms