RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 HLA-HP01893 362 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 CELA3BP08861 270 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 OR4A8P0C604 315 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 PGA4P0DJD7 388 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 PGA3P0DJD8 388 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 UMPSP11172 480 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 CAPZA2P47755 286 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 IDH3GP51553 393 aaPredicted RBP9.12□□□□□ -0.95
CCDC9-203ENST00000596938 SEC24CP53992 1094 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 UGT2B15P54855 530 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 RAB1AP62820 205 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 RPL18Q07020 188 aaKnown RBP9.12□□□□□ -0.95
CCDC9-203ENST00000596938 GSG1Q2KHT4 349 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 NRN1LQ496H8 165 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 CLEC2AQ6UVW9 174 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 NANOGNBQ7Z5D8 188 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 PFN4Q8NHR9 129 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
CCDC9-203ENST00000596938 FBXO17Q96EF6 278 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 PRRC1Q96M27 445 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 MRPL13Q9BYD1 178 aaKnown RBP9.12□□□□□ -0.95
CCDC9-203ENST00000596938 PLK3Q9H4B4 646 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 SEC61A2Q9H9S3 476 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 C20orf141Q9NUB4 165 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 FBXL3Q9UKT7 428 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 NPIPB13A6NJU9 1138 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 NPIPB4C9JG80 1138 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 CXCR6O00574 342 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 NME4O00746 187 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 GSTA4O15217 222 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 DHHO43323 396 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SNX3O60493 162 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SEC14L2O76054 403 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 UBL3O95164 117 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 IGHG1P01857 330 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 IFNW1P05000 195 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 F13BP05160 661 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 QDPRP09417 244 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 OR8G3PP0DMU2 310 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 CD79AP11912 226 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF35P13682 527 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 B4GALT1P15291 398 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF14P17017 642 aaPredicted RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 NR4A1P22736 598 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 PRDX6P30041 224 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 THBS4P35443 961 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 AQP2P41181 271 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 DAP3P51398 398 aaKnown RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SLC7A2P52569 658 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF133P52736 654 aaPredicted RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SNRPD2P62316 118 aaKnown RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 PIGFQ07326 219 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 KRTAP1-1Q07627 177 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 NPRL3Q12980 569 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 ARMC4Q5T2S8 1044 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 CBLL1Q75N03 491 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 HDDC2Q7Z4H3 204 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 VTCN1Q7Z7D3 282 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 DPPA2Q7Z7J5 298 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 MYPOPQ86VE0 399 aaPredicted RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SKA3Q8IX90 412 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 RNF113BQ8IZP6 322 aaKnown RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SLC22A24Q8N4F4 322 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 BPIFA2Q96DR5 249 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 DOK1Q99704 481 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 INIPQ9NRY2 104 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF224Q9NZL3 707 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 GMPR2Q9P2T1 348 aaKnown RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 STX18Q9P2W9 335 aaKnown RBP9.11□□□□□ -0.95
CCDC9-203ENST00000596938 ABCD2Q9UBJ2 740 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 SPEF1Q9Y4P9 236 aa9.11□□□□□ -0.95
CCDC9-203ENST00000596938 IGHV4-30-2A0A087WSY4 118 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 A0A096LNT2 108 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 TMEM129A0AVI4 362 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 GMNCA6NCL1 334 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 FFAR1O14842 300 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 SERPINA5P05154 406 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 CSF3P09919 207 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 ACADSP16219 412 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 SLC25A16P16260 332 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 NPR2P20594 1047 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 DRD4P21917 467 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 LSP1P33241 339 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 GIPRP48546 466 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 EVX1P49640 407 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 GSK3BP49841 420 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 PPOXP50336 477 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 NUDT2P50583 147 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 PSME3P61289 254 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 RUNX1T1Q06455 604 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 LOXL1Q08397 574 aaPredicted RBP9.1□□□□□ -0.95
CCDC9-203ENST00000596938 DAG1Q14118 895 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 MELKQ14680 651 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 TRAM2Q15035 370 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 TAF11Q15544 211 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 ANKDD1AQ495B1 522 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 IFI44LQ53G44 452 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 VHLLQ6RSH7 139 aa9.1□□□□□ -0.95
CCDC9-203ENST00000596938 FKBP9P1Q75LS8 142 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms