RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 B3GLCTQ6Y288 498 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 TUBA1AQ71U36 451 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 CCDC36Q8IYA8 594 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 SLC7A13Q8TCU3 470 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 ASB10Q8WXI3 467 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 NSMCE2Q96MF7 247 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 SLC38A2Q96QD8 506 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 SEPHS2Q99611 448 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 TMUB1Q9BVT8 246 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 MRPL13Q9BYD1 178 aaKnown RBP18.38■□□□□ 0.53
PNKP-209ENST00000596726 MOV10Q9HCE1 1003 aaKnown RBP18.38■□□□□ 0.53
PNKP-209ENST00000596726 LAMP3Q9UQV4 416 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 POFUT2Q9Y2G5 429 aa18.38■□□□□ 0.53
PNKP-209ENST00000596726 A0A1W2PRQ8 180 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 ZNF503-AS2A6NEH8 195 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 CENPBD1B2RD01 187 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 SEC14L2O76054 403 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 IGKV3-15P01624 115 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 CD8AP01732 235 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 H1F0P07305 194 aaKnown RBP18.37■□□□□ 0.53
PNKP-209ENST00000596726 CBR1P16152 277 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 PTH2RP49190 550 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 RUNX1T1Q06455 604 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 DGCR6Q14129 220 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 HIST3H3Q16695 136 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 ANKDD1AQ495B1 522 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 ARMC4Q5T2S8 1044 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 ZNF730Q6ZMV8 503 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 TMPRSS11FQ6ZWK6 438 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 DTX2Q86UW9 622 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 MEX3DQ86XN8 651 aaKnown RBP18.37■□□□□ 0.53
PNKP-209ENST00000596726 ARHGAP24Q8N264 748 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 DEPDC4Q8N2C3 294 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 LRRC75AQ8NAA5 344 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 DHRS1Q96LJ7 313 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 GRIP2Q9C0E4 1043 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 CXorf56Q9H5V9 222 aa18.37■□□□□ 0.53
PNKP-209ENST00000596726 FAM32AQ9Y421 112 aaKnown RBP18.37■□□□□ 0.53
PNKP-209ENST00000596726 hCG_2039718K7EN88 272 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 IGHG1P01857 330 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 ACADSP16219 412 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 SLC9A3P48764 834 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 DAP3P51398 398 aaKnown RBP18.36■□□□□ 0.53
PNKP-209ENST00000596726 ALG10Q5BKT4 473 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 PODNL1Q6PEZ8 512 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 PRSS57Q6UWY2 283 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 ZNF813Q6ZN06 617 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 RINLQ6ZS11 566 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 WFDC11Q8NEX6 87 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 BCAS4Q8TDM0 211 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 FOXB1Q99853 325 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 DHRS9Q9BPW9 319 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 TRAF4Q9BUZ4 470 aaPredicted RBP18.36■□□□□ 0.53
PNKP-209ENST00000596726 KATNB1Q9BVA0 655 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 TXNIPQ9H3M7 391 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 B3GNT2Q9NY97 397 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 V9GYQ6 96 aa18.36■□□□□ 0.53
PNKP-209ENST00000596726 EFCAB9A8MZ26 197 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 ARHGEF9O43307 516 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 TRMUO75648 421 aaKnown RBP18.35■□□□□ 0.53
PNKP-209ENST00000596726 DIRAS1O95057 198 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 IGHMP01871 453 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 CECR9P0C854 216 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 SAGP10523 405 aaPredicted RBP18.35■□□□□ 0.53
PNKP-209ENST00000596726 ZNF133P52736 654 aaPredicted RBP18.35■□□□□ 0.53
PNKP-209ENST00000596726 TAF11Q15544 211 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 HDDC2Q7Z4H3 204 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 CDK20Q8IZL9 346 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 PERPQ96FX8 193 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 TNFRSF13CQ96RJ3 184 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 FUZQ9BT04 418 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 ZNF224Q9NZL3 707 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 ACTR3BQ9P1U1 418 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 POU2F3Q9UKI9 436 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 MOKQ9UQ07 419 aa18.35■□□□□ 0.53
PNKP-209ENST00000596726 FLNAP21333 2647 aaKnown RBP18.34■□□□□ 0.53
PNKP-209ENST00000596726 TRAV27A0A087WT01 109 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 MCIDASD6RGH6 385 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 CDC42EP2O14613 210 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 DHHO43323 396 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 QDPRP09417 244 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 ITGA2P17301 1181 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 TTKP33981 857 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 Q5PR19 223 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 RRM2BQ7LG56 351 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 PIWIL3Q7Z3Z3 882 aaKnown RBP18.34■□□□□ 0.53
PNKP-209ENST00000596726 OAFQ86UD1 273 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 MDP1Q86V88 176 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 NOXO1Q8NFA2 376 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 OR13C2Q8NGS9 318 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 OR51A7Q8NH64 312 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 MCHR2Q969V1 340 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 ZNF75AQ96N20 296 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 ZNF347Q96SE7 839 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 C1orf21Q9H246 121 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 SEC61A2Q9H9S3 476 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 FAIMQ9NVQ4 179 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 STX18Q9P2W9 335 aaKnown RBP18.34■□□□□ 0.53
PNKP-209ENST00000596726 TMEM5Q9Y2B1 443 aa18.34■□□□□ 0.53
PNKP-209ENST00000596726 ATP23Q9Y6H3 246 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms