RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DPRXA6NFQ7 191 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 RPL36A-HNRNPH2H7BZ11 118 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 GNGT2O14610 69 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 TRMUO75648 421 aaKnown RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 WNT11O96014 354 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 IGHG1P01857 330 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 CD3EP07766 207 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 QDPRP09417 244 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 ACADSP16219 412 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 OMPP47874 163 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 DAP3P51398 398 aaKnown RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 NR1H2P55055 460 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 ERVK-25P63136 954 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 RUNX1T1Q06455 604 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 BSPH1Q075Z2 132 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 NCMAPQ5T1S8 102 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 ANKRD16Q6P6B7 361 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 KLHL17Q6TDP4 642 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 SPNS3Q6ZMD2 512 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 PIWIL3Q7Z3Z3 882 aaKnown RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 C1orf162Q8NEQ5 155 aaPredicted RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 GNPDA2Q8TDQ7 276 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 CANT1Q8WVQ1 401 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 BCL2L2Q92843 193 aaPredicted RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 NINJ1Q92982 152 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 TMEM54Q969K7 222 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 SLC25A44Q96H78 314 aaPredicted RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.86
LIG1-211ENST00000596457 LRR1Q96L50 414 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 DHRS1Q96LJ7 313 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 CHID1Q9BWS9 393 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 NDEL1Q9GZM8 345 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 TXNIPQ9H3M7 391 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 PLEKHA6Q9Y2H5 1048 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 U3KQV3 271 aa9.71□□□□□ -0.86
LIG1-211ENST00000596457 DHRS12A0PJE2 317 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 AQP12BA6NM10 295 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 ZNF99A8MXY4 864 aaPredicted RBP9.7□□□□□ -0.86
LIG1-211ENST00000596457 ARHGEF9O43307 516 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 KRT36O76013 467 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 CCNB2O95067 398 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 CST1P01037 141 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 TSPAN19P0C672 248 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 PGA4P0DJD7 388 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 PGA3P0DJD8 388 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 RAP2AP10114 183 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 CD79AP11912 226 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 B4GALT1P15291 398 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 IFNGR2P38484 337 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 SH3BGRP55822 239 aaPredicted RBP9.7□□□□□ -0.86
LIG1-211ENST00000596457 RPL27P61353 136 aaKnown RBP9.7□□□□□ -0.86
LIG1-211ENST00000596457 CD47Q08722 323 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 TAF11Q15544 211 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 OR2T5Q6IEZ7 315 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 ADAM5Q6NVV9 412 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 ZNF813Q6ZN06 617 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 ZNF704Q6ZNC4 412 aaPredicted RBP9.7□□□□□ -0.86
LIG1-211ENST00000596457 HDDC2Q7Z4H3 204 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 ZER1Q7Z7L7 766 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 AQP12AQ8IXF9 295 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 ADGRG5Q8IZF4 528 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 C17orf78Q8N4C9 275 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 LRRC75AQ8NAA5 344 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 NOXO1Q8NFA2 376 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 OR9Q2Q8NGE9 314 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 OR2T29Q8NH02 315 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 NSMAFQ92636 917 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 HTRA1Q92743 480 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 HDAC2Q92769 488 aaKnown RBP9.7□□□□□ -0.86
LIG1-211ENST00000596457 NEUROG1Q92886 237 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 RADILQ96JH8 1075 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 TSPAN32Q96QS1 320 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 GPA33Q99795 319 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 FUZQ9BT04 418 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 KATNB1Q9BVA0 655 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 PLEKHF2Q9H8W4 249 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 REEP1Q9H902 201 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 VNN3Q9NY84 501 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 GRHPRQ9UBQ7 328 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 SLC7A8Q9UHI5 535 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 SAMHD1Q9Y3Z3 626 aaKnown RBP9.7□□□□□ -0.86
LIG1-211ENST00000596457 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 LYVE1Q9Y5Y7 322 aa9.7□□□□□ -0.86
LIG1-211ENST00000596457 H7C1C5 153 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 EBAG9O00559 213 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ABCD4O14678 606 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 DHHO43323 396 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 PTP4A3O75365 173 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 CIB2O75838 187 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 NDUFB2O95178 105 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 SLC2A10O95528 541 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 DNASE1P24855 282 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 MAGEA2P43356 314 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ZNF84P51523 738 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 LCN6P62502 163 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 RPS4XP62701 263 aaKnown RBP9.69□□□□□ -0.86
LIG1-211ENST00000596457 FMODQ06828 376 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 PIGFQ07326 219 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 SPOCK1Q08629 439 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms