RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
VRK3-210ENST00000596121 ZNF224Q9NZL3 707 aa9.73□□□□□ -0.85
VRK3-210ENST00000596121 ZNF346Q9UL40 294 aaKnown RBP9.73□□□□□ -0.85
VRK3-210ENST00000596121 PRPF19Q9UMS4 504 aaKnown RBP9.73□□□□□ -0.85
VRK3-210ENST00000596121 AMDHD2Q9Y303 409 aa9.73□□□□□ -0.85
VRK3-210ENST00000596121 FAM32AQ9Y421 112 aaKnown RBP9.73□□□□□ -0.85
VRK3-210ENST00000596121 F8P00451 2351 aa9.73□□□□□ -0.85
VRK3-210ENST00000596121 ZNF469Q96JG9 3925 aaPredicted RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 DSCAMO60469 2012 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 IGKV1D-43A0A0B4J1Z2 117 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 IGHV1-18A0A0C4DH31 117 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 SH3PXD2BA1X283 911 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 HTR3EA5X5Y0 456 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 E7EQL1 145 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ABCD4O14678 606 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 AKAP8O43823 692 aaKnown RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 TRMUO75648 421 aaKnown RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 BCL10O95999 233 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 SOD3P08294 240 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 CELA3BP08861 270 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 DANCRP0C864 163 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 SAGP10523 405 aaPredicted RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 MAGEA2P43356 314 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 MYBPC1Q00872 1141 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 BNIP1Q12981 228 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 KEAP1Q14145 624 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 DEFB113Q30KQ7 82 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 PGGHGQ32M88 737 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ZNF672Q499Z4 452 aaPredicted RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 ALG10Q5BKT4 473 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 FGD3Q5JSP0 725 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ZNF627Q7L945 461 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ZER1Q7Z7L7 766 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 DHFR2Q86XF0 187 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ZDHHC21Q8IVQ6 265 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ZNF611Q8N823 705 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 SYT14Q8NB59 555 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 CCDC124Q96CT7 223 aaKnown RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 SLC25A44Q96H78 314 aaPredicted RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 ZNF75AQ96N20 296 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 TSPAN32Q96QS1 320 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 FOXC2Q99958 501 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 ULBP2Q9BZM5 246 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 VNN3Q9NY84 501 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 B3GNT2Q9NY97 397 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 CRNNQ9UBG3 495 aaPredicted RBP9.72□□□□□ -0.85
VRK3-210ENST00000596121 ARID1AO14497 2285 aa9.72□□□□□ -0.85
VRK3-210ENST00000596121 A0A1W2PRG6 482 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 MCIDASD6RGH6 385 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 IGLV1-44P01699 117 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 CD8AP01732 235 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 HLA-HP01893 362 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 FABP3P05413 133 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 QDPRP09417 244 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 PATE4P0C8F1 98 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 B4GALT1P15291 398 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 ACADSP16219 412 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 ITGA2P17301 1181 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 RRM2P31350 389 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.86
VRK3-210ENST00000596121 CTXN1P60606 82 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 ERVK-25P63136 954 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 SPIBQ01892 262 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 FMODQ06828 376 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 PPP1R8Q12972 351 aaKnown RBP9.71□□□□□ -0.86
VRK3-210ENST00000596121 KLHL24Q6TFL4 600 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 TMEM108Q6UXF1 575 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 OAFQ86UD1 273 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 SKA3Q8IX90 412 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 OR4C15Q8NGM1 316 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 ZNF519Q8TB69 540 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 MCHR2Q969V1 340 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 ZNF566Q969W8 418 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 KCNK17Q96T54 332 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 BTBD10Q9BSF8 475 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 CADM1Q9BY67 442 aaKnown RBP9.71□□□□□ -0.86
VRK3-210ENST00000596121 TXNIPQ9H3M7 391 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 SIGLEC7Q9Y286 467 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 UGT2A1Q9Y4X1 527 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 ACANP16112 2415 aa9.71□□□□□ -0.86
VRK3-210ENST00000596121 HEATR1Q9H583 2144 aaKnown RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 NPIPB13A6NJU9 1138 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 NPIPB4C9JG80 1138 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 ATP6V1G2-DDX39BF2Z307 99 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 IMPA2O14732 288 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 GYG2O15488 501 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 GSC2O15499 205 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 DHHO43323 396 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 GADD45GO95257 159 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 SLC2A10O95528 541 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 WNT11O96014 354 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 IGHG1P01857 330 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 IGHMP01871 453 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 CECR9P0C854 216 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 HOXB1P14653 301 aaPredicted RBP9.7□□□□□ -0.86
VRK3-210ENST00000596121 CBR1P16152 277 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 PTAFRP25105 342 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 CALCRP30988 508 aa9.7□□□□□ -0.86
VRK3-210ENST00000596121 SLC9A3P48764 834 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms