RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CRYBB2P43320 205 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 CSNK1A1P48729 337 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 CCL8P80075 99 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 MVKQ03426 396 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 NKPD1Q17RQ9 610 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 KRT71Q3SY84 523 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 MMEL1Q495T6 779 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 TNFAIP8L3Q5GJ75 292 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 C6orf10Q5SRN2 563 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 AVPI1Q5T686 147 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 FAM91A1Q658Y4 838 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 RGS7BPQ6MZT1 257 aaPredicted RBP8.5□□□□□ -1.05
LIG1-209ENST00000596104 ULK3Q6PHR2 472 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 DHRS4L2Q6PKH6 230 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 PIWIL3Q7Z3Z3 882 aaKnown RBP8.5□□□□□ -1.05
LIG1-209ENST00000596104 PXKQ7Z7A4 578 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 SNX32Q86XE0 403 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 PAQR4Q8N4S7 273 aaPredicted RBP8.5□□□□□ -1.05
LIG1-209ENST00000596104 OR4M2Q8NGB6 313 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 OR9I1Q8NGQ6 314 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 GTF2H4Q92759 462 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 SLC47A1Q96FL8 570 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 MAELQ96JY0 434 aaKnown RBP8.5□□□□□ -1.05
LIG1-209ENST00000596104 ASPNQ9BXN1 380 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 RMND5AQ9H871 391 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 ZIM2Q9NZV7 527 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 OPN4Q9UHM6 478 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 A0A0B4J2E0 115 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 A0A1B0GX12 115 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 TRPC5OSA6NMA1 111 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 ZNF726A6NNF4 738 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 CLIC1O00299 241 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 RGS16O15492 202 aaPredicted RBP8.49□□□□□ -1.05
LIG1-209ENST00000596104 ZNF500O60304 480 aaPredicted RBP8.49□□□□□ -1.05
LIG1-209ENST00000596104 TPST2O60704 377 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 SNNO75324 88 aaPredicted RBP8.49□□□□□ -1.05
LIG1-209ENST00000596104 IGHV2-5P01817 119 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 FAM157BP0CG42 384 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 ARAFP10398 606 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 LSP1P33241 339 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 KLF3P57682 345 aaPredicted RBP8.49□□□□□ -1.05
LIG1-209ENST00000596104 ERVS71-1P61550 626 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 UBA52P62987 128 aaKnown RBP8.49□□□□□ -1.05
LIG1-209ENST00000596104 FADDQ13158 208 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 PMS2P3Q13401 168 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 PCGF3Q3KNV8 242 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 MSRB3Q8IXL7 192 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 C10orf111Q8N326 155 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 SLC22A24Q8N4F4 322 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 SLC30A7Q8NEW0 376 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 RNF217Q8TC41 542 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 TMEM54Q969K7 222 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 RAB39BQ96DA2 213 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 EPYCQ99645 322 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 WFDC6Q9BQY6 131 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 ZNF747Q9BV97 191 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 ZNF696Q9H7X3 374 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 TMEM38BQ9NVV0 291 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 TESQ9UGI8 421 aaKnown RBP8.49□□□□□ -1.05
LIG1-209ENST00000596104 WIPI2Q9Y4P8 454 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 CACNG2Q9Y698 323 aa8.49□□□□□ -1.05
LIG1-209ENST00000596104 IGHV1-69-2A0A0G2JMI3 117 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SLC22A23A1A5C7 686 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SERPINI2O75830 405 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SNAP29O95721 258 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 BCL10O95999 233 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 OR8G3PP0DMU2 310 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 HKR1P10072 659 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 CCL2P13500 99 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 POLR2JP52435 117 aaKnown RBP8.48□□□□□ -1.05
LIG1-209ENST00000596104 CDH12P55289 794 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 BIDP55957 195 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SELENOVP59797 346 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 RBBP4Q09028 425 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 OR1Q1Q15612 314 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 DCAF12L2Q5VW00 463 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 NXNQ6DKJ4 435 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 TMEM154Q6P9G4 183 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 LRFN4Q6PJG9 635 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SLC2A7Q6PXP3 512 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SHISA2Q6UWI4 295 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 USP51Q70EK9 711 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 MAVSQ7Z434 540 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 MIER2Q8N344 545 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 BPIFB2Q8N4F0 458 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 MREGQ8N565 214 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 OR6X1Q8NH79 312 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 NFKBIDQ8NI38 313 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 ZNF519Q8TB69 540 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 SYNPRQ8TBG9 265 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 GTF3AQ92664 365 aaKnown RBP8.48□□□□□ -1.05
LIG1-209ENST00000596104 DVL3Q92997 716 aaPredicted RBP8.48□□□□□ -1.05
LIG1-209ENST00000596104 SH3GL3Q99963 347 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 TMEM43Q9BTV4 400 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 RAD21L1Q9H4I0 556 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 TMEM27Q9HBJ8 222 aa8.48□□□□□ -1.05
LIG1-209ENST00000596104 TCF7L2Q9NQB0 619 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms