RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 LAPTM4AQ15012 233 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 HIST3H3Q16695 136 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ARMC4Q5T2S8 1044 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 LRFN4Q6PJG9 635 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC22A25Q6T423 547 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 KLHL24Q6TFL4 600 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 MBOAT2Q6ZWT7 520 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 LRRC75AQ8NAA5 344 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 OR6N1Q8NGY5 312 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 SMAP2Q8WU79 429 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ASB10Q8WXI3 467 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF566Q969W8 418 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 PERPQ96FX8 193 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC25A44Q96H78 314 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 DHRS1Q96LJ7 313 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC38A2Q96QD8 506 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 MRPL13Q9BYD1 178 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 GSX2Q9BZM3 304 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ULBP2Q9BZM5 246 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ANKRD19PQ9H560 264 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 DLL4Q9NR61 685 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 INIPQ9NRY2 104 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF701Q9NV72 531 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 NDE1Q9NXR1 346 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 B3GNT2Q9NY97 397 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 CISD1Q9NZ45 108 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 GLTPQ9NZD2 209 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 MGAT4BQ9UQ53 548 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 YLPM1P49750 1951 aaKnown RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 TRAV27A0A087WT01 109 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 TRBV4-1A0A0J9YWV2 114 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 A0A1W2PRQ8 180 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 HTR3EA5X5Y0 456 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 NPIPB13A6NJU9 1138 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 NPIPB4C9JG80 1138 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 BCL10O95999 233 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 H1F0P07305 194 aaKnown RBP9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 CECR9P0C854 216 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 B4GALT1P15291 398 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 RHCEP18577 417 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 ATP6V1B2P21281 511 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 CALB2P22676 271 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 IFNA8P32881 189 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 GPR4P46093 362 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 MNAT1P51948 309 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 UBE2NP61088 152 aaKnown RBP9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 DGCR6Q14129 220 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 SEC23BQ15437 767 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 SPATS1Q496A3 300 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 Q5PR19 223 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 PODNL1Q6PEZ8 512 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF730Q6ZMV8 503 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF813Q6ZN06 617 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 DTX2Q86UW9 622 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 IGFN1Q86VF2 1251 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 RNF113BQ8IZP6 322 aaKnown RBP9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 FAM169BQ8N8A8 192 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 NOXO1Q8NFA2 376 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 OR13C2Q8NGS9 318 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 TMEM171Q8WVE6 324 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 HTRA1Q92743 480 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 NMD3Q96D46 503 aaKnown RBP9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 PYURFQ96I23 114 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 RADILQ96JH8 1075 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 NSMCE2Q96MF7 247 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF75AQ96N20 296 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF347Q96SE7 839 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 FOXB1Q99853 325 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 TRAF4Q9BUZ4 470 aaPredicted RBP9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 B3GAT2Q9NPZ5 323 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 MOKQ9UQ07 419 aa9.56□□□□□ -0.88
SHKBP1-206ENST00000595523 IGKV1D-43A0A0B4J1Z2 117 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 A0A1W2PRG6 482 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 EFCAB9A8MZ26 197 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TMCC2O75069 709 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 GMNNO75496 209 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TRMUO75648 421 aaKnown RBP9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 IGHG1P01857 330 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 IGHMP01871 453 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 HLA-HP01893 362 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 SAGP10523 405 aaPredicted RBP9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 CBR1P16152 277 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 CALCRP30988 508 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 CDKN1AP38936 164 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 LIMS1P48059 325 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF133P52736 654 aaPredicted RBP9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 MYBPC1Q00872 1141 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 NAAAQ02083 359 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 C3orf36Q3SXR2 165 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 ALG10Q5BKT4 473 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 CYP2R1Q6VVX0 501 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 TMPRSS11FQ6ZWK6 438 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 MDP1Q86V88 176 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 CYP4Z1Q86W10 505 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 SYT14Q8NB59 555 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 OR51A7Q8NH64 312 aa9.55□□□□□ -0.88
SHKBP1-206ENST00000595523 FGFBP3Q8TAT2 258 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms