RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 BLOC1S5-TXNDC5H3BN57 136 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 B4GALT1P15291 398 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 CBR1P16152 277 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 NCK1P16333 377 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 FUT1P19526 365 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 YAP1P46937 504 aaKnown RBP13.14□□□□□ -0.31
TRIM28-205ENST00000595028 CAPZA2P47755 286 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 FABP6P51161 128 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 IDH3GP51553 393 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF813Q6ZN06 617 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 MYPOPQ86VE0 399 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-205ENST00000595028 CCDC36Q8IYA8 594 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 SLC25A44Q96H78 314 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-205ENST00000595028 FOXB1Q99853 325 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 KCNS3Q9BQ31 491 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 BDH2Q9BUT1 245 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 POFUT2Q9Y2G5 429 aa13.14□□□□□ -0.31
TRIM28-205ENST00000595028 J3KTA2 159 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 FFAR1O14842 300 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 DCTN3O75935 186 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 CRYAAP02489 173 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 CELA3BP08861 270 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 TSPAN19P0C672 248 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 PGA4P0DJD7 388 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 PGA3P0DJD8 388 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 FUT4P22083 530 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 ARR3P36575 388 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 AQP2P41181 271 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 TRAM2Q15035 370 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 FKBP9P1Q75LS8 142 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 MDP1Q86V88 176 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 CIARTQ8N365 385 aaPredicted RBP13.13□□□□□ -0.31
TRIM28-205ENST00000595028 RBM15BQ8NDT2 890 aaKnown RBP13.13□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF566Q969W8 418 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 LRRC37BQ96QE4 947 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 FNDC11Q9BVV2 318 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 CACNG6Q9BXT2 260 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 GLTPQ9NZD2 209 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 ADA2Q9NZK5 511 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 RHCGQ9UBD6 479 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 EGFL7Q9UHF1 273 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
TRIM28-205ENST00000595028 A0A1W2PRG6 482 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NPIPB13A6NJU9 1138 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NPIPB4C9JG80 1138 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 MCIDASD6RGH6 385 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NDUFS7O75251 213 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 PRSS23O95084 383 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 BCL10O95999 233 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 IGHG1P01857 330 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 HLA-HP01893 362 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 F13BP05160 661 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 IFI30P13284 250 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 APOBEC3AP31941 199 aaPredicted RBP13.12□□□□□ -0.31
TRIM28-205ENST00000595028 DAP3P51398 398 aaKnown RBP13.12□□□□□ -0.31
TRIM28-205ENST00000595028 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NPRL3Q12980 569 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 FXNQ16595 210 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 HDDC2Q7Z4H3 204 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NRMQ8IXM6 262 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 PGAM4Q8N0Y7 254 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 RNF148Q8N7C7 305 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NOXO1Q8NFA2 376 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 ASB10Q8WXI3 467 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 BPIFA2Q96DR5 249 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 SEPHS2Q99611 448 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 BARX1Q9HBU1 254 aaPredicted RBP13.12□□□□□ -0.31
TRIM28-205ENST00000595028 NOX3Q9HBY0 568 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 INIPQ9NRY2 104 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 B3GNT2Q9NY97 397 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 ZNF224Q9NZL3 707 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 GDF2Q9UK05 429 aaPredicted RBP13.12□□□□□ -0.31
TRIM28-205ENST00000595028 RPS6KA6Q9UK32 745 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 ENPP4Q9Y6X5 453 aa13.12□□□□□ -0.31
TRIM28-205ENST00000595028 CENPBD1B2RD01 187 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 H7C417 338 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 CALCRP30988 508 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 CLRN1P58418 232 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 LRFN4Q6PJG9 635 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 TSEN54Q7Z6J9 526 aaKnown RBP13.11□□□□□ -0.31
TRIM28-205ENST00000595028 FAM156AQ8NDB6 213 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 ACOT11Q8WXI4 607 aaPredicted RBP13.11□□□□□ -0.31
TRIM28-205ENST00000595028 CA10Q9NS85 328 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 TMEM38BQ9NVV0 291 aa13.11□□□□□ -0.31
TRIM28-205ENST00000595028 STX18Q9P2W9 335 aaKnown RBP13.11□□□□□ -0.31
TRIM28-205ENST00000595028 SAMD4AQ9UPU9 718 aaKnown RBP13.11□□□□□ -0.31
TRIM28-205ENST00000595028 ANK3Q12955 4377 aaKnown RBP13.11□□□□□ -0.31
TRIM28-205ENST00000595028 CR1P17927 2039 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 IGHV2OR16-5A0A0B4J2B6 119 aa13.1□□□□□ -0.31
TRIM28-205ENST00000595028 SMAD7O15105 426 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms