RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 YAF2Q8IY57 180 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 MUC20Q8N307 709 aaPredicted RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 WDR89Q96FK6 387 aaPredicted RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 EXOSC3Q9NQT5 275 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 MYO7AQ13402 2215 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 TMEM131Q92545 1883 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 TRAV8-7A0A075B6U6 113 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 FXYD6-FXYD2A0A087WZ82 144 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ELOA3DA6NLF2 546 aaPredicted RBP12.03□□□□□ -0.48
VRK3-209ENST00000594948 PSMD9O00233 223 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 PMS2P2O95744 297 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ITGB2P05107 769 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 TMIGD3P0DMS9 266 aaPredicted RBP12.03□□□□□ -0.48
VRK3-209ENST00000594948 ALOX5APP20292 161 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 AGTR1P30556 359 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 AQP2P41181 271 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 SOX2P48431 317 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 LSSP48449 732 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ACTBP60709 375 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ACTG1P63261 375 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
VRK3-209ENST00000594948 C2orf68Q2NKX9 166 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ITPRIPL2Q3MIP1 535 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ELOA3BQ3SY89 546 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ALG10Q5BKT4 473 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ATG4DQ86TL0 474 aaPredicted RBP12.03□□□□□ -0.48
VRK3-209ENST00000594948 LSM14AQ8ND56 463 aaKnown RBP12.03□□□□□ -0.48
VRK3-209ENST00000594948 ELOA3Q8NG57 546 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 PHOSPHO2Q8TCD6 241 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ADAMTS18Q8TE60 1221 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 RIT1Q92963 219 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 GABRG3Q99928 467 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 FXYD6Q9H0Q3 95 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 CAPN10Q9HC96 672 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ZC4H2Q9NQZ6 224 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 ZNF107Q9UII5 783 aaPredicted RBP12.03□□□□□ -0.48
VRK3-209ENST00000594948 LAMP5Q9UJQ1 280 aa12.03□□□□□ -0.48
VRK3-209ENST00000594948 A0A0D9SG52 128 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 SLC17A2O00624 439 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 SDC3O75056 442 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 RDH16O75452 317 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 RENP00797 406 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 RLN1P04808 185 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 ASAH2BP0C7U1 165 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 GTF2F2P13984 249 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 MGMTP16455 207 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 PRSS3P35030 304 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 MAZP56270 477 aaKnown RBP12.02□□□□□ -0.48
VRK3-209ENST00000594948 CTXN1P60606 82 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 DMWDQ09019 674 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 KLHL26Q53HC5 615 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 NKAIN2Q5VXU1 208 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 LPCAT3Q6P1A2 487 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 MAMSTRQ6ZN01 415 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 ARHGEF39Q8N4T4 335 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 ZNF676Q8N7Q3 588 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 TMEM229BQ8NBD8 167 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 CLEC1AQ8NC01 280 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 OR52H1Q8NGJ2 320 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 GPX8Q8TED1 209 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 TNFAIP8L1Q8WVP5 186 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 C4orf45Q96LM5 186 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 SLC25A21Q9BQT8 299 aaPredicted RBP12.02□□□□□ -0.48
VRK3-209ENST00000594948 C1QTNF6Q9BXI9 259 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 SCPEP1Q9HB40 452 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 MMP25Q9NPA2 562 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 ERVK-19Q9WJR5 959 aa12.02□□□□□ -0.48
VRK3-209ENST00000594948 MRPS33Q9Y291 106 aaKnown RBP12.02□□□□□ -0.48
VRK3-209ENST00000594948 ARHGEF17Q96PE2 2063 aaPredicted RBP12.02□□□□□ -0.49
VRK3-209ENST00000594948 TRBV23OR9-2A0A075B6M9 112 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 LOC100289279A0A1B0GTE1 492 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 SIX6O95475 246 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 WNT11O96014 354 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 CD8AP01732 235 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 MAS1P04201 325 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 CT45A8P0DMV1 189 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 CT45A9P0DMV2 189 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 CD37P11049 281 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 PVRP15151 417 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 TPMTP51580 245 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 TAS2R19P59542 299 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 SKP1P63208 163 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 FGL1Q08830 312 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 RAB11BQ15907 218 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 GXYLT1Q4G148 440 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 CT45A2Q5DJT8 189 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 EEF1A1P5Q5VTE0 462 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 FAM166AQ6J272 317 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 STEAP1BQ6NZ63 245 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 SHISA5Q8N114 240 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 STPG2Q8N412 459 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 BCORP1Q8N888 145 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 ZNF454Q8N9F8 522 aa12.02□□□□□ -0.49
VRK3-209ENST00000594948 TSACCQ96A04 125 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms