RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 KTI12Q96EK9 354 aaPredicted RBP13.61□□□□□ -0.23
FOXA3-202ENST00000594297 TRMT61AQ96FX7 289 aaKnown RBP13.61□□□□□ -0.23
FOXA3-202ENST00000594297 OR11A1Q9GZK7 315 aa13.61□□□□□ -0.23
FOXA3-202ENST00000594297 SMURF2Q9HAU4 748 aa13.61□□□□□ -0.23
FOXA3-202ENST00000594297 MEPEQ9NQ76 525 aaPredicted RBP13.61□□□□□ -0.23
FOXA3-202ENST00000594297 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
FOXA3-202ENST00000594297 IGKV1D-42A0A075B6H8 117 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 SOCS2O14508 198 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 EIF1AYO14602 144 aaKnown RBP13.6□□□□□ -0.23
FOXA3-202ENST00000594297 PIP5K1CO60331 668 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 NPIPB7O75200 414 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 AQP8O94778 261 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 PMS2P2O95744 297 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 IGHV4-39P01824 125 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 ALPLP05186 524 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 PTNP21246 168 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 GPR4P46093 362 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 CLDN20P56880 219 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 CARD18P57730 90 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 PRPS1P60891 318 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 ESRRGP62508 458 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 EGR4Q05215 589 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 SGCBQ16585 318 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 ZNF74Q16587 644 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 KDM4DQ6B0I6 523 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 TMPPEQ6ZT21 453 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 EPHX4Q8IUS5 362 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 SLC43A2Q8N370 569 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 ZNF555Q8NEP9 628 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 OR52L1Q8NGH7 329 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 LILRB1Q8NHL6 650 aaPredicted RBP13.6□□□□□ -0.23
FOXA3-202ENST00000594297 LIPHQ8WWY8 451 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 OSTF1Q92882 214 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 TAAR8Q969N4 342 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 C19orf24Q9BVV8 132 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 ACTR6Q9GZN1 396 aa13.6□□□□□ -0.23
FOXA3-202ENST00000594297 SMPD3Q9NY59 655 aaPredicted RBP13.6□□□□□ -0.23
FOXA3-202ENST00000594297 H3BN98 237 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 EFNA2O43921 213 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 GPRIN2O60269 458 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 NDUFS7O75251 213 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 SYNGR4O95473 234 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 DANCRP0C864 163 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 OSMP13725 252 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 GSSP48637 474 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 DAPP51397 102 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 PMS2P3Q13401 168 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 OR7A5Q15622 319 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 ZBED5Q49AG3 693 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 RASSF6Q6ZTQ3 369 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 PARP8Q8N3A8 854 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 SCAIQ8N9R8 606 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 OR6K3Q8NGY3 331 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 OR2V1Q8NHB1 315 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 TEX47Q8TBZ9 253 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 NEUROG1Q92886 237 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 FBXW5Q969U6 566 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 NPAS1Q99742 590 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 PRRG3Q9BZD7 231 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 C20orf141Q9NUB4 165 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 CDC42EP3Q9UKI2 254 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 CLEC4AQ9UMR7 237 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 RNF115Q9Y4L5 304 aa13.59□□□□□ -0.23
FOXA3-202ENST00000594297 ZC3H12DA2A288 527 aaKnown RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 BGLAPP02818 100 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 OPN1LWP04000 364 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 FCGR2AP12318 317 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 ZNF26P17031 533 aaPredicted RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 MAKP20794 623 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 IL11P20809 199 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 FUT4P22083 530 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 EIF1AXP47813 144 aaKnown RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 DIO1P49895 249 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 RAC3P60763 192 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 SRSF2Q01130 221 aaKnown RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 TMEM225Q6GV28 225 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 ALKBH2Q6NS38 261 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 ADAM5Q6NVV9 412 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 SMARCD3Q6STE5 483 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 H1FNTQ75WM6 255 aaPredicted RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 GALNT5Q7Z7M9 940 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 OR5J2Q8NH18 312 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 OR51A7Q8NH64 312 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 FANK1Q8TC84 345 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 NRG4Q8WWG1 115 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 CPNE4Q96A23 557 aaPredicted RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 ARL5BQ96KC2 179 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 SLC29A1Q99808 456 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 NIPSNAP1Q9BPW8 284 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 PRRG4Q9BZD6 226 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 RIBC2Q9H4K1 309 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 Q9H521 79 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
FOXA3-202ENST00000594297 B3GALT5Q9Y2C3 310 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 EMC9Q9Y3B6 208 aa13.58□□□□□ -0.24
FOXA3-202ENST00000594297 A0A096LNT2 108 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms