RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IFITM2Q01629 132 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 RNPS1Q15287 305 aaKnown RBP17.49■□□□□ 0.39
LSM4-203ENST00000593829 ZNF613Q6PF04 617 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 SLC43A2Q8N370 569 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 HTRA1Q92743 480 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 DNAJA3Q96EY1 480 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 TPD52L3Q96J77 140 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 ICE1Q9Y2F5 2266 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 LOC110117498-PIK3R3F6TDL0 507 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 DNPH1O43598 174 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 TGFBR1P36897 503 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 KIR2DL2P43627 348 aaPredicted RBP17.48■□□□□ 0.39
LSM4-203ENST00000593829 OR2B6P58173 313 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 LSRQ86X29 649 aaPredicted RBP17.48■□□□□ 0.39
LSM4-203ENST00000593829 PARP16Q8N5Y8 322 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 STK35Q8TDR2 534 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 PIGMQ9H3S5 423 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 MED12LQ86YW9 2145 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 PTPN13Q12923 2485 aa17.48■□□□□ 0.39
LSM4-203ENST00000593829 IGHV3-15A0A0B4J1V0 119 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 SMAD9O15198 467 aaKnown RBP17.47■□□□□ 0.39
LSM4-203ENST00000593829 GRNP28799 593 aaKnown RBP17.47■□□□□ 0.39
LSM4-203ENST00000593829 SLC35A1P78382 337 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 TFF3Q07654 80 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 IRF3Q14653 427 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 GUSBP1Q15486 140 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 ENTPD8Q5MY95 495 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 C1orf140Q5VVS0 124 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 FAM214BQ7L5A3 538 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 ABHD3Q8WU67 409 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 CCDC32Q9BV29 185 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 TPK1Q9H3S4 243 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 SIAEQ9HAT2 523 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 CLEC4AQ9UMR7 237 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 EMC9Q9Y3B6 208 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 CPSF4LA6NMK7 179 aaKnown RBP17.47■□□□□ 0.39
LSM4-203ENST00000593829 EEF1E1-BLOC1S5C9J1V9 151 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 EEF1E1O43324 174 aaKnown RBP17.47■□□□□ 0.39
LSM4-203ENST00000593829 SS18L1O75177 396 aaPredicted RBP17.47■□□□□ 0.39
LSM4-203ENST00000593829 NPIPB7O75200 414 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 TNFRSF1BP20333 461 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 ASCL1P50553 236 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 CDH12P55289 794 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 CTBP2P56545 445 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 SIRPAP78324 504 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 VTCN1Q7Z7D3 282 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 SLC7A5P1Q8MH63 180 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 GGHQ92820 318 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 UBE2FQ969M7 185 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 STARD4Q96DR4 205 aa17.47■□□□□ 0.39
LSM4-203ENST00000593829 EIF1BO60739 113 aaKnown RBP17.46■□□□□ 0.39
LSM4-203ENST00000593829 SPNP16150 400 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 OR1E2P47887 323 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 AGAP6Q5VW22 663 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 THOC7Q6I9Y2 204 aaKnown RBP17.46■□□□□ 0.39
LSM4-203ENST00000593829 VWA1Q6PCB0 445 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 DEPDC4Q8N2C3 294 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 IL17RDQ8NFM7 739 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 LRRC46Q96FV0 321 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 C6orf62Q9GZU0 229 aaPredicted RBP17.46■□□□□ 0.39
LSM4-203ENST00000593829 GP6Q9HCN6 339 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 JKAMPQ9P055 326 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 KLHL9Q9P2J3 617 aa17.46■□□□□ 0.39
LSM4-203ENST00000593829 A0A087WUJ7 227 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 TRAPPC13A5PLN9 417 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 LIPT2A6NK58 231 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 C19orf84I3L1E1 186 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 CYTIPO60759 359 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 DIRAS1O95057 198 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 AHSA1O95433 338 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 APOA1P02647 267 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 COL8A1P27658 744 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 UGT2B15P54855 530 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 EGR4Q05215 589 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 RASGEF1BQ0VAM2 473 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 SP5Q6BEB4 398 aaPredicted RBP17.45■□□□□ 0.38
LSM4-203ENST00000593829 C5orf46Q6UWT4 87 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 CCBE1Q6UXH8 406 aaPredicted RBP17.45■□□□□ 0.38
LSM4-203ENST00000593829 GDPD3Q7L5L3 318 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 ZNF367Q7RTV3 350 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 CCDC190Q86UF4 302 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 TAPBPLQ9BX59 468 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 NEK6Q9HC98 313 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 A0A075B6Q4 140 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 FAM172BPA6NC97 362 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 CHP2O43745 196 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 DBTP11182 482 aaKnown RBP17.45■□□□□ 0.38
LSM4-203ENST00000593829 GABRB1P18505 474 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 KLK2P20151 261 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 H3F3AP84243 136 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 OR7A5Q15622 319 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 FBXL19-AS1Q494R0 122 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 DEF8Q6ZN54 512 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 OR6K3Q8NGY3 331 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 SETD6Q8TBK2 473 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 NAA11Q9BSU3 229 aaPredicted RBP17.45■□□□□ 0.38
LSM4-203ENST00000593829 POLR2J2Q9GZM3 115 aaKnown RBP17.45■□□□□ 0.38
LSM4-203ENST00000593829 POLR2J3Q9H1A7 115 aaKnown RBP17.45■□□□□ 0.38
LSM4-203ENST00000593829 KLHL13Q9P2N7 655 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms