RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 CPLX4Q7Z7G2 160 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 NUP37Q8NFH4 326 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 HTRA1Q92743 480 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 TMEM54Q969K7 222 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 PRRC1Q96M27 445 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 RHNO1Q9BSD3 238 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 SEC61A2Q9H9S3 476 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 C20orf141Q9NUB4 165 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
TRIM28-203ENST00000593582 GMPR2Q9P2T1 348 aaKnown RBP13.26□□□□□ -0.29
TRIM28-203ENST00000593582 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
TRIM28-203ENST00000593582 HEATR1Q9H583 2144 aaKnown RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 IGHV2OR16-5A0A0B4J2B6 119 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 B9A039 149 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 MCIDASD6RGH6 385 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 PDE5AO76074 875 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 IGHG1P01857 330 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 IFNW1P05000 195 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 LSP1P33241 339 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 GSK3BP49841 420 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 DAP3P51398 398 aaKnown RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 EFNA4P52798 201 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 CLRN1P58418 232 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 PIGFQ07326 219 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 MST1LQ2TV78 715 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 KRTAP21-3Q3LHN1 58 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 PIWIL3Q7Z3Z3 882 aaKnown RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 HDDC2Q7Z4H3 204 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 MYPOPQ86VE0 399 aaPredicted RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 MAPK1IP1LQ8NDC0 245 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 LIPHQ8WWY8 451 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 GEMIN6Q8WXD5 167 aaKnown RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 KCTD14Q9BQ13 255 aaPredicted RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
TRIM28-203ENST00000593582 A4GNTQ9UNA3 340 aa13.25□□□□□ -0.29
TRIM28-203ENST00000593582 HTR3EA5X5Y0 456 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 SNX3O60493 162 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 UBL3O95164 117 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 RAB36O95755 333 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 F13BP05160 661 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 QDPRP09417 244 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 PGA4P0DJD7 388 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 PGA3P0DJD8 388 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 PRDX6P30041 224 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 AQP2P41181 271 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 PTDSS1P48651 473 aaKnown RBP13.24□□□□□ -0.29
TRIM28-203ENST00000593582 PSME3P61289 254 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 HGFACQ04756 655 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 ADIPOQQ15848 244 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 LRFN4Q6PJG9 635 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 FKBP9P1Q75LS8 142 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 CBLL1Q75N03 491 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 SLC22A24Q8N4F4 322 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 BPIFA2Q96DR5 249 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 FNDC11Q9BVV2 318 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 ZNF442Q9H7R0 627 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 INIPQ9NRY2 104 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 STX18Q9P2W9 335 aaKnown RBP13.24□□□□□ -0.29
TRIM28-203ENST00000593582 FBXO9Q9UK97 447 aaPredicted RBP13.24□□□□□ -0.29
TRIM28-203ENST00000593582 FBXL3Q9UKT7 428 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 ALPK2Q86TB3 2170 aa13.24□□□□□ -0.29
TRIM28-203ENST00000593582 IGHV4-30-2A0A087WSY4 118 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 GMNCA6NCL1 334 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 CENPBD1B2RD01 187 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 DHHO43323 396 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 FARS2O95363 451 aaKnown RBP13.23□□□□□ -0.29
TRIM28-203ENST00000593582 F12P00748 615 aaPredicted RBP13.23□□□□□ -0.29
TRIM28-203ENST00000593582 SERPINA1P01009 418 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
TRIM28-203ENST00000593582 OR8G3PP0DMU2 310 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 DRD4P21917 467 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 YAP1P46937 504 aaKnown RBP13.23□□□□□ -0.29
TRIM28-203ENST00000593582 GIPRP48546 466 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 RAB1AP62820 205 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 PPP2R2BQ00005 443 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 DAG1Q14118 895 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 TRAM2Q15035 370 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 EFNB3Q15768 340 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 OFCC1Q8IZS5 231 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 ZNF525Q8N782 197 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 SYT14Q8NB59 555 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 OR10H5Q8NGA6 315 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 FAM162AQ96A26 154 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 HSH2DQ96JZ2 352 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 NOX3Q9HBY0 568 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 SPAG4Q9NPE6 437 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 TMEM38BQ9NVV0 291 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 ZNF224Q9NZL3 707 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 RHCGQ9UBD6 479 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 ABCD2Q9UBJ2 740 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 SPEF1Q9Y4P9 236 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 SNX13Q9Y5W8 968 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 FKBP7Q9Y680 259 aa13.23□□□□□ -0.29
TRIM28-203ENST00000593582 CSPG4Q6UVK1 2322 aa13.22□□□□□ -0.29
TRIM28-203ENST00000593582 J3KTA2 159 aa13.22□□□□□ -0.29
TRIM28-203ENST00000593582 PIP5K1CO60331 668 aa13.22□□□□□ -0.29
TRIM28-203ENST00000593582 CSF3P09919 207 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms