RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 HOXD1Q9GZZ0 328 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 OR51I1Q9H343 314 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 CENPHQ9H3R5 247 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 MEAF6Q9HAF1 191 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 TMBIM4Q9HC24 238 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 HHATLQ9HCP6 504 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 MKLN1Q9UL63 735 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 MCTS1Q9ULC4 181 aaKnown RBP6.63□□□□□ -1.35
VMP1-213ENST00000591877 PCDHGB4Q9UN71 923 aa6.63□□□□□ -1.35
VMP1-213ENST00000591877 A8MZ25 164 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 C9JVG2 144 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 POLR3GO15318 223 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 ZNF264O43296 627 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 EIF4E2O60573 245 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 PAGE4O60829 102 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 SNNO75324 88 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 SOX30O94993 753 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 SYNGR4O95473 234 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 CPSF4O95639 269 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 NUDT14O95848 222 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ADAP00813 363 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 HOXB5P09067 269 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 OR12D1P0DN82 309 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 UQCRC2P22695 453 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ELK4P28324 431 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 AGTR1P30556 359 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 EIF1P41567 113 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 CDKN2CP42773 168 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 NME5P56597 212 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 RIPPLY3P57055 190 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 CARD18P57730 90 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 HOXA4Q00056 320 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 SKP2Q13309 424 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 KEAP1Q14145 624 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 FGFBP1Q14512 234 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 QPRTQ15274 297 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 MED22Q15528 200 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 EXOC3L2Q2M3D2 409 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 TMEM176BQ3YBM2 270 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 FAM174BQ3ZCQ3 159 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 TTMPQ5BVD1 217 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 SERTAD4-AS1Q5TG53 156 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 TYW3Q6IPR3 259 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 TNFAIP8L2Q6P589 184 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 BHLHB9Q6PI77 547 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 STAC2Q6ZMT1 411 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 FRRS1Q6ZNA5 592 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 NUFIP2Q7Z417 695 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 UEVLDQ8IX04 471 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 LRRC34Q8IZ02 419 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ZNF614Q8N883 585 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 WFDC11Q8NEX6 87 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 OR5W2Q8NH69 310 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 RNF128Q8TEB7 428 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ABHD3Q8WU67 409 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 NEURL3Q96EH8 262 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 PIK3IP1Q96FE7 263 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ZC3HAV1LQ96H79 300 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 PGAM5Q96HS1 289 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ADAD1Q96M93 576 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 ZNF347Q96SE7 839 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 PAIP2Q9BPZ3 127 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 SLC39A3Q9BRY0 314 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 INPP5KQ9BT40 448 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 MED18Q9BUE0 208 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 THUMPD3Q9BV44 507 aaKnown RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 KLHL4Q9C0H6 718 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ZNF350Q9GZX5 532 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 LAT2Q9GZY6 243 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 WDR55Q9H6Y2 383 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 SCPEP1Q9HB40 452 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 ARL8BQ9NVJ2 186 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 AIG1Q9NVV5 245 aa6.62□□□□□ -1.35
VMP1-213ENST00000591877 PAQR5Q9NXK6 330 aaPredicted RBP6.62□□□□□ -1.35
VMP1-213ENST00000591877 ARID1AO14497 2285 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 IGHV3-15A0A0B4J1V0 119 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 GOLGA8QA0A0J9YX86 632 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 TMEM120BA0PK00 339 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 GOLGA8OA6NCC3 632 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 DUXAA6NLW8 204 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 CLDN24A6NM45 220 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 E9PBE3 544 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 GOLGA8NF8WBI6 632 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 H3BNH8 94 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 HMGN4O00479 90 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 KIAA0513O60268 411 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 DIAPH2O60879 1101 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 STX11O75558 287 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 GCM2O75603 506 aaPredicted RBP6.61□□□□□ -1.35
VMP1-213ENST00000591877 H6PDO95479 791 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 AK1P00568 194 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 PLGP00747 810 aaPredicted RBP6.61□□□□□ -1.35
VMP1-213ENST00000591877 CSTAP01040 98 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 HEXAP06865 529 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 GUSBP08236 651 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 ME2P23368 584 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 EDNRAP25101 427 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 POU1F1P28069 291 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 TTKP33981 857 aa6.61□□□□□ -1.35
VMP1-213ENST00000591877 IDUAP35475 653 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms