RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 M0R3G1 203 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 FRS3O43559 492 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 MITFO75030 526 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PTTG1O95997 202 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 SERPINA1P01009 418 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RNH1P13489 461 aaKnown RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 NCF1P14598 390 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 SLC25A16P16260 332 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RHCEP18577 417 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 EPORP19235 508 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 KRT20P35900 424 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 CASP2P42575 452 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PCYT1AP49585 367 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 TMED10P49755 219 aaKnown RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 EIF2B2P49770 351 aaKnown RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RGS4P49798 205 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 TPD52P55327 224 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RAB8AP61006 207 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PRKCDQ05655 676 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 GGTLC2Q14390 218 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 IRF3Q14653 427 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PTGR1Q14914 329 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 GTDC1Q4AE62 458 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 CCDC92Q53HC0 331 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 FBXO48Q5FWF7 155 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 ADAM5Q6NVV9 412 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 OPN5Q6U736 354 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 LRRC70Q7Z2Q7 622 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PTOV1Q86YD1 416 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 C9orf40Q8IXQ3 194 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 KLHDC8AQ8IYD2 350 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 C10orf111Q8N326 155 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 CAMKVQ8NCB2 501 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 FAM83FQ8NEG4 500 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 CNIH3Q8TBE1 160 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PTPMT1Q8WUK0 201 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 APH1BQ8WW43 257 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 KAT2AQ92830 837 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RFKQ969G6 155 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 ESAMQ96AP7 390 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 C3orf49Q96BT1 292 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 REPS1Q96D71 796 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 ZG16BQ96DA0 208 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 LGALS12Q96DT0 336 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 FAM120BQ96EK7 910 aaKnown RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 CMTM7Q96FZ5 175 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 C7orf34Q96L11 122 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 OR52E6Q96RD3 313 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 EPYCQ99645 322 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 THUMPD3Q9BV44 507 aaKnown RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 PTDSS2Q9BVG9 487 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 DGCR6LQ9BY27 220 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 ACPTQ9BZG2 426 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 OR8D2Q9GZM6 311 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 ADAP2Q9NPF8 381 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 OPTCQ9UBM4 332 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RPS6KA6Q9UK32 745 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 RNF115Q9Y4L5 304 aa6.81□□□□□ -1.32
SMAD4-209ENST00000589941 IGHV4-61A0A0C4DH41 118 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 AGAP5A6NIR3 686 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 E5RI56 91 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 GNGT2O14610 69 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 XPNPEP2O43895 674 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 NUDT3O95989 172 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 KRT6AP02538 564 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 KRT6BP04259 564 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SLC35G6P0C7Q6 338 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 GSTT2P0CG29 244 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 GSTT2BP0CG30 244 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 GABRB1P18505 474 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SDC1P18827 310 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 USF1P22415 310 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 PRKACGP22612 351 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 IMPA1P29218 277 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 S100A3P33764 101 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SRP14P37108 136 aaKnown RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 HNF4AP41235 474 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 MAP2K4P45985 399 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SLC6A12P48065 614 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 KRT6CP48668 564 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 HSPA7P48741 367 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 STARP49675 285 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 TBPL1P62380 186 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ABATP80404 500 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 IL5RAQ01344 420 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF45Q02386 682 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 CD300CQ08708 224 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SF3B4Q15427 424 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SMN1Q16637 294 aaKnown RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 NDUFA5Q16718 116 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 EXOC3L2Q2M3D2 409 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 C18orf21Q32NC0 220 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF404Q494X3 552 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF672Q499Z4 452 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 RGS7BPQ6MZT1 257 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-209ENST00000589941 TMEM64Q6YI46 380 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 SLC46A3Q7Z3Q1 461 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 GRAMD2AQ8IUY3 354 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 TCAIMQ8N3R3 496 aa6.8□□□□□ -1.32
SMAD4-209ENST00000589941 MFSD9Q8NBP5 474 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms