RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 NDRG3Q9UGV2 375 aa17.28■□□□□ 0.36
CIRBP-220ENST00000588917 OAZ3Q9UMX2 235 aa17.28■□□□□ 0.36
CIRBP-220ENST00000588917 BAIAP2Q9UQB8 552 aa17.28■□□□□ 0.36
CIRBP-220ENST00000588917 POFUT2Q9Y2G5 429 aa17.28■□□□□ 0.36
CIRBP-220ENST00000588917 PRSS44E7EML9 344 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 H0YHG0 523 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 RPL36A-HNRNPH2H7BZ11 118 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 IGHV3-9P01782 118 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 OSMP13725 252 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 ZNF26P17031 533 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 SDHAP31040 664 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 CLRN1P58418 232 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 FXYD6P3P58550 94 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 ELF3P78545 371 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 FAM27E3Q08E93 113 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 MELKQ14680 651 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 STK11Q15831 433 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 CARD17Q5XLA6 110 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 OR7E24Q6IFN5 339 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 IGFN1Q86VF2 1251 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 HS3ST5Q8IZT8 346 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 STEAP2Q8NFT2 490 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 ZNF570Q96NI8 536 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 ERMAPQ96PL5 475 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 RBM4BQ9BQ04 359 aaKnown RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 ALG12Q9BV10 488 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 RBM4Q9BWF3 364 aaKnown RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 TEX12Q9BXU0 123 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 MRPL13Q9BYD1 178 aaKnown RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 GABARAPL1Q9H0R8 117 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 PAPOLBQ9NRJ5 636 aaKnown RBP17.27■□□□□ 0.36
CIRBP-220ENST00000588917 GLTPQ9NZD2 209 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 IER3IP1Q9Y5U9 82 aa17.27■□□□□ 0.36
CIRBP-220ENST00000588917 H3BN98 237 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TXNDC12O95881 172 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 PGA4P0DJD7 388 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 PGA3P0DJD8 388 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 PPP3CBP16298 524 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 EDNRAP25101 427 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 NOS3P29474 1203 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 DAPP51397 102 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TOP3AQ13472 1001 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-220ENST00000588917 THEM4Q5T1C6 240 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 C1QTNF12Q5T7M4 302 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 KLHL17Q6TDP4 642 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 THSD4Q6ZMP0 1018 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 SSX8Q7RTT4 187 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 CXorf67Q86X51 503 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-220ENST00000588917 OR2T33Q8NG76 320 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TEX47Q8TBZ9 253 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 KISS1RQ969F8 398 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TMEM54Q969K7 222 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TSPAN32Q96QS1 320 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 C9orf16Q9BUW7 83 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TSSK6Q9BXA6 273 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 EGLN3Q9H6Z9 239 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 KRT84Q9NSB2 600 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 TBC1D23Q9NUY8 699 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 IL20RAQ9UHF4 553 aa17.26■□□□□ 0.35
CIRBP-220ENST00000588917 MAGED1Q9Y5V3 778 aaPredicted RBP17.26■□□□□ 0.35
CIRBP-220ENST00000588917 ABCA12Q86UK0 2595 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 CIB4A0PJX0 185 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 M0R3G1 203 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ARHGEF9O43307 516 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 UPK3AO75631 287 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 TRMUO75648 421 aaKnown RBP17.25■□□□□ 0.35
CIRBP-220ENST00000588917 COX5AP20674 150 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 UGT2B10P36537 528 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 SH3BGRP55822 239 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ESRRGP62508 458 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ROR2Q01974 943 aaKnown RBP17.25■□□□□ 0.35
CIRBP-220ENST00000588917 HIST3H3Q16695 136 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 STAC2Q6ZMT1 411 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 FAM122BQ7Z309 247 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ADCK1Q86TW2 530 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 P2RY8Q86VZ1 359 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 PARP8Q8N3A8 854 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ZNF519Q8TB69 540 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 MAGEE2Q8TD90 523 aaPredicted RBP17.25■□□□□ 0.35
CIRBP-220ENST00000588917 Q96M85 177 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ULBP2Q9BZM5 246 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 SMURF2Q9HAU4 748 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 GPR35Q9HC97 309 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 REV1Q9UBZ9 1251 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 ADAM18Q9Y3Q7 739 aa17.25■□□□□ 0.35
CIRBP-220ENST00000588917 SAC3D1A6NKF1 404 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 PDLIM1O00151 329 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 MGRN1O60291 552 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 ANPEPP15144 967 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 IGHV1-2P23083 117 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 IL32P24001 234 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 KDM4DQ6B0I6 523 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 BHLHA15Q7RTS1 189 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-220ENST00000588917 ZNF433Q8N7K0 673 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-220ENST00000588917 C1orf162Q8NEQ5 155 aaPredicted RBP17.24■□□□□ 0.35
CIRBP-220ENST00000588917 BOD1Q96IK1 185 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 KCNK17Q96T54 332 aa17.24■□□□□ 0.35
CIRBP-220ENST00000588917 SPOCK3Q9BQ16 436 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms