RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 FAM98AQ8NCA5 519 aaKnown RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 GPR26Q8NDV2 337 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 GPR32P1Q8NGA4 272 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 OR2T35Q8NGX2 323 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 BBS10Q8TAM1 723 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 TRMT10AQ8TBZ6 339 aaKnown RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 HAVCR2Q8TDQ0 301 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 SMIM4Q8WVI0 70 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ASB11Q8WXH4 323 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 KAT2AQ92830 837 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 RIT1Q92963 219 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 YIPF5Q969M3 257 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 TMEM203Q969S6 136 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 RAB7BQ96AH8 199 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ORAI1Q96D31 301 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 WDR34Q96EX3 536 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ELMOD3Q96FG2 381 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 SCRN2Q96FV2 425 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 FOPNLQ96NB1 174 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 LYSMD1Q96S90 227 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ZNF607Q96SK3 696 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 DDOQ99489 341 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 THAP7Q9BT49 309 aaPredicted RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 EFCAB11Q9BUY7 163 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 SPATA5L1Q9BVQ7 753 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 FAIM2Q9BWQ8 316 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 TEX12Q9BXU0 123 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 RBCK1Q9BYM8 510 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 SLC19A3Q9BZV2 496 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 DNTTIP1Q9H147 329 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ZFYVE1Q9HBF4 777 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 GPN1Q9HCN4 374 aaPredicted RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 TRIM36Q9NQ86 728 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 IMP3Q9NV31 184 aaKnown RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 HPF1Q9NWY4 346 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ACTR10Q9NZ32 417 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 MED11Q9P086 117 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ABRACLQ9P1F3 81 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 NFKBIL1Q9UBC1 381 aaPredicted RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 P2RX2Q9UBL9 471 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 PURGQ9UJV8 347 aaKnown RBP3.77□□□□□ -1.81
LIG3-211ENST00000588713 FBXL3Q9UKT7 428 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 FBXW2Q9UKT8 454 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ICKQ9UPZ9 632 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 SLC9A8Q9Y2E8 581 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 ZNF835Q9Y2P0 537 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 PRSS21Q9Y6M0 314 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 HCFC1P51610 2035 aa3.77□□□□□ -1.81
LIG3-211ENST00000588713 TRAV6A0A075B6T7 132 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 LOC105369274A0A096LPK9 316 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CXorf51AA0A1B0GTR3 108 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 GNG14A0A1W2PPG7 69 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SHISA3A0PJX4 238 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 OR2M5A3KFT3 312 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SMIM30A4D0T7 59 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CD8B2A6NJW9 211 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 ARHGEF33A8MVX0 844 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SNRPGP15A8MWD9 76 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 C9J4A7 227 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 NPIPA5E9PKD4 350 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 H3BUI4 141 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 DNASE2O00115 360 aaPredicted RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 FOXE1O00358 373 aaPredicted RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 SYT5O00445 386 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 PDCD5O14737 125 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 TNFRSF10CO14798 259 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SULT1B1O43704 296 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 LANCL1O43813 399 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SUSD5O60279 629 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CREBL2O60519 120 aaPredicted RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 SELENOFO60613 162 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 GALR3O60755 368 aaPredicted RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 STX11O75558 287 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 REM1O75628 298 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 NCR1O76036 304 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 APOC1P02654 83 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 TFP02787 698 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CATP04040 527 aaKnown RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 IFNA4P05014 189 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 IL5P05113 134 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 BCHEP06276 602 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SMIM6P0DI80 62 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 TFPIP10646 304 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CD8BP10966 210 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 ZNF8P17098 575 aaPredicted RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 MMP11P24347 488 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 FPR3P25089 353 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 PPP2R1BP30154 601 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 S100A11P31949 105 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CCR7P32248 378 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 TRIM23P36406 574 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 MNDAP41218 407 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 CSNK1DP48730 415 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 KHKP50053 298 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 ANXA11P50995 505 aaKnown RBP3.76□□□□□ -1.81
LIG3-211ENST00000588713 CTBP2P56545 445 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 NRG3P56975 720 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 SOX8P57073 446 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 TSPAN31Q12999 210 aa3.76□□□□□ -1.81
LIG3-211ENST00000588713 MFAP5Q13361 173 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms