RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 WNK2Q9Y3S1 2297 aa7.39□□□□□ -1.23
SDF2-204ENST00000587338 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 CENPVL1A0A0U1RR11 272 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 TCRBV5S2A0A599 114 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 TCRBV3S1A0A5B6 114 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 VSTM5A8MXK1 200 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 M0QX08 132 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 LGI1O95970 557 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 BCL10O95999 233 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 IFNA14P01570 189 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 TFP02787 698 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 GPIP06744 558 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 TFPTP0C1Z6 253 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 GAAP10253 952 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 UMPSP11172 480 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 BMP2P12643 396 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 RYKP34925 604 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 APOBEC1P41238 236 aaKnown RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 CRISP3P54108 245 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 UBA52P62987 128 aaKnown RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 TXNL4AP83876 142 aaKnown RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 HGFACQ04756 655 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 RIPK1Q13546 671 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 SLC17A1Q14916 467 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 GPR68Q15743 365 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 FAM98BQ52LJ0 330 aaKnown RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 CYBRD1Q53TN4 286 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 MTX3Q5HYI7 312 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 ZFP1Q6P2D0 407 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 AAED1Q7RTV5 226 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 ABHD12BQ7Z5M8 362 aaPredicted RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 HMGN2P46Q86SG4 172 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 PATL1Q86TB9 770 aaKnown RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 KRT73Q86Y46 540 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 TEX29Q8N6K0 151 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 ZDHHC22Q8N966 263 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 POMGNT2Q8NAT1 580 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 NUP37Q8NFH4 326 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 OR1K1Q8NGR3 316 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 BBS10Q8TAM1 723 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 MIPOL1Q8TD10 442 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 CANT1Q8WVQ1 401 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 SLC47A1Q96FL8 570 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 PYURFQ96I23 114 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 ZNF607Q96SK3 696 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 DOK1Q99704 481 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 ZNF442Q9H7R0 627 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 CALML5Q9NZT1 146 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 SAMD4AQ9UPU9 718 aaKnown RBP7.38□□□□□ -1.23
SDF2-204ENST00000587338 PPIAL4AQ9Y536 164 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 WNK1Q9H4A3 2382 aa7.38□□□□□ -1.23
SDF2-204ENST00000587338 A0A096LPE4 126 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 TRAV20A0A0B4J274 112 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 A0A0G2JPF8 293 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 A0A1W2PPZ6 126 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 TMEM129A0AVI4 362 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 OR6C65A6NJZ3 312 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 HNRNPCL2B2RXH8 293 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 HNRNPCL3B7ZW38 293 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 ZNF587BE7ETH6 402 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 WNT9BO14905 357 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 EIF1BO60739 113 aaKnown RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 SERPINB7O75635 380 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 TIPRLO75663 272 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 AVPP01185 164 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 MT-ND1P03886 318 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 CHRM4P08173 479 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 IGFBP1P08833 259 aaPredicted RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 CELA3BP08861 270 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 HNRNPCL4P0DMR1 293 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 HKR1P10072 659 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 ANPEPP15144 967 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 ADRA2CP18825 462 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 SLC35A1P78382 337 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 SNTB2Q13425 540 aaKnown RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 FXNQ16595 210 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 ZNF311Q5JNZ3 666 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 EIF3MQ7L2H7 374 aaKnown RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 GRINAQ7Z429 371 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 C1QL2Q7Z5L3 287 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 MYPOPQ86VE0 399 aaPredicted RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 ARMC8Q8IUR7 673 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 ADGRG5Q8IZF4 528 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 FAM86B1Q8N7N1 296 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 SMYD1Q8NB12 490 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 LZICQ8WZA0 190 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 TMEM45BQ96B21 275 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 ALKBH3Q96Q83 286 aaPredicted RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 SDF2Q99470 211 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 NAA11Q9BSU3 229 aaPredicted RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 SPATA5L1Q9BVQ7 753 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 RNPEPL1Q9HAU8 725 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 DDX28Q9NUL7 540 aaKnown RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 DCAF13Q9NV06 445 aaKnown RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 NKX1-2Q9UD57 310 aaPredicted RBP7.37□□□□□ -1.23
SDF2-204ENST00000587338 KCNE5Q9UJ90 142 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 SLC13A4Q9UKG4 626 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 BAG5Q9UL15 447 aa7.37□□□□□ -1.23
SDF2-204ENST00000587338 MKLN1Q9UL63 735 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms