RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 SYNGR3O43761 229 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 LYPD3O95274 346 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 RAB36O95755 333 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 CH25HO95992 272 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 NAT2P11245 290 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 CCL2P13500 99 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 COL8A2P25067 703 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 THBS2P35442 1172 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 SRP14P37108 136 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 PCBP3P57721 371 aaKnown RBP13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 CYP51A1Q16850 503 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 ZNF627Q7L945 461 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 RETREG3Q86VR2 466 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 CCDC36Q8IYA8 594 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 IL17RDQ8NFM7 739 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 OR5J2Q8NH18 312 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 OR6S1Q8NH40 331 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 YIPF5Q969M3 257 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 TSPAN32Q96QS1 320 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 ARHGDIGQ99819 225 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 SH3GL3Q99963 347 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 CCDC28BQ9BUN5 200 aa13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 TMEFF2Q9UIK5 374 aaPredicted RBP13.05□□□□□ -0.32
PRKCSH-204ENST00000587290 EVPLLA8MZ36 301 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 FAM157AC9JC47 383 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 SERPINB7O75635 380 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 TGDSO95455 350 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 FAM157BP0CG42 384 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 ITGA2P17301 1181 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 GLRXP35754 106 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 ERVS71-1P61550 626 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 SQLEQ14534 574 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 FXNQ16595 210 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 RUNDC3AQ59EK9 446 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 TTMPQ5BVD1 217 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 ENTPD8Q5MY95 495 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 GKAP1Q5VSY0 366 aaPredicted RBP13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 SLC35D2Q76EJ3 337 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 PXKQ7Z7A4 578 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 DHDDSQ86SQ9 333 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 CLDND2Q8NHS1 167 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 TMEM54Q969K7 222 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 DUSP13Q9UII6 198 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 GMEB1Q9Y692 573 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 ARHGAP32A7KAX9 2087 aa13.04□□□□□ -0.32
PRKCSH-204ENST00000587290 A0A1W2PPW3 197 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 M0QX08 132 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 CHP2O43745 196 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 RGS9O75916 674 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 UBL3O95164 117 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 CLPTM1O96005 669 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 MYBPC1Q00872 1141 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 GALK2Q01415 458 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 ZNF74Q16587 644 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 AGBL2Q5U5Z8 902 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 ZNF613Q6PF04 617 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 LRFN4Q6PJG9 635 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 SLC22A24Q8N4F4 322 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 C11orf65Q8NCR3 313 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 ADAMTS16Q8TE57 1224 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 GTF3AQ92664 365 aaKnown RBP13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 HPS1Q92902 700 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 TAMM41Q96BW9 452 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 TAS2R5Q9NYW4 299 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 TREM2Q9NZC2 230 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 GLTPQ9NZD2 209 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 CORO2BQ9UQ03 480 aa13.03□□□□□ -0.32
PRKCSH-204ENST00000587290 RNF13O43567 381 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 ERLIN1O75477 346 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 OR6A2O95222 327 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 MT-ATP6P00846 226 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 TNFRSF1BP20333 461 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 CD247P20963 164 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 MAGEB1P43366 347 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 GPR6P46095 362 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 ATP4BP51164 291 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 CRYBA2P53672 197 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 RUNX1T1Q06455 604 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 CGREF1Q99674 301 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 ZNF275Q9NSD4 429 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 TMEM38BQ9NVV0 291 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 LEF1Q9UJU2 399 aaPredicted RBP13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.33
PRKCSH-204ENST00000587290 DYSFO75923 2080 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 TCF21O43680 179 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 CDC14BO60729 498 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 SHOX2O60902 331 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 PGA4P0DJD7 388 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 PGA3P0DJD8 388 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 SAGP10523 405 aaPredicted RBP13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 UMPSP11172 480 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 EVX1P49640 407 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 GLO1Q04760 184 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 HNRNPA0Q13151 305 aaKnown RBP13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
PRKCSH-204ENST00000587290 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms