RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	GTPBP3	Q969Y2	492 aa	Known RBP	10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	KCNK17	Q96T54	332 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	NIPSNAP1	Q9BPW8	284 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	ALG12	Q9BV10	488 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	KATNB1	Q9BVA0	655 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	OSBPL10	Q9BXB5	764 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	POLDIP3	Q9BY77	421 aa	Known RBP	10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	ZNF556	Q9HAH1	456 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	GLTP	Q9NZD2	209 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	GRHPR	Q9UBQ7	328 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	NDRG3	Q9UGV2	375 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	COL12A1	Q99715	3063 aa		10.86	□□□□□ -0.67
PKN1-208	ENST00000586900	TUBAL3	A6NHL2	446 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ANKRD65	E5RJM6	399 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900		G3V2T6	193 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	TP53	P04637	393 aa	Predicted RBP	10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ITGA5	P08648	1049 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	PRKACG	P22612	351 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	IL32	P24001	234 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	SDHA	P31040	664 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	CCKAR	P32238	428 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ACVR1B	P36896	505 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ZNF133	P52736	654 aa	Predicted RBP	10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ERVK-25	P63136	954 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ROR2	Q01974	943 aa	Known RBP	10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	FAHD1	Q6P587	224 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	MEX3B	Q6ZN04	569 aa	Known RBP	10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	LINGO2	Q7L985	606 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	IGFN1	Q86VF2	1251 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	HS3ST5	Q8IZT8	346 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	C17orf78	Q8N4C9	275 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	NOXO1	Q8NFA2	376 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	OR52L1	Q8NGH7	329 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	STMN2	Q93045	179 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	SAMD8	Q96LT4	415 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	DACH2	Q96NX9	599 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	MUS81	Q96NY9	551 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	TSPAN32	Q96QS1	320 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	PKP2	Q99959	881 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	GABARAPL1	Q9H0R8	117 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	SMURF2	Q9HAU4	748 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	GPR35	Q9HC97	309 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	REV1	Q9UBZ9	1251 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	ADAM18	Q9Y3Q7	739 aa		10.85	□□□□□ -0.67
PKN1-208	ENST00000586900	PKDREJ	Q9NTG1	2253 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	CIB4	A0PJX0	185 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900		M0R3G1	203 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	LYZL6	O75951	148 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	OSM	P13725	252 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	HOXB1	P14653	301 aa	Predicted RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ZNF23	P17027	643 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	KIR2DL3	P43628	341 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	FOXG1	P55316	489 aa	Predicted RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	CLRN1	P58418	232 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	RUNX1T1	Q06455	604 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	LGALS3BP	Q08380	585 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	TOP3A	Q13472	1001 aa	Predicted RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	GABRA6	Q16445	453 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	PHYHD1	Q5SRE7	291 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	THEM4	Q5T1C6	240 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	CARD17	Q5XLA6	110 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	LRFN4	Q6PJG9	635 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	KLHL17	Q6TDP4	642 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ZNF627	Q7L945	461 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ADCK1	Q86TW2	530 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	PARP8	Q8N3A8	854 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ATG16L2	Q8NAA4	619 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	FAM222B	Q8WU58	562 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	HSD17B8	Q92506	261 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	HDAC2	Q92769	488 aa	Known RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	NMD3	Q96D46	503 aa	Known RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900		Q96M85	177 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ZNF570	Q96NI8	536 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ALKBH3	Q96Q83	286 aa	Predicted RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	RBP7	Q96R05	134 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	SNX18	Q96RF0	628 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	IFT27	Q9BW83	186 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ULBP2	Q9BZM5	246 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	ACTR6	Q9GZN1	396 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	SEMA6A	Q9H2E6	1030 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	EGLN3	Q9H6Z9	239 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	CRLF2	Q9HC73	371 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	KCNN3	Q9UGI6	736 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	IL20RA	Q9UHF4	553 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	BAIAP2	Q9UQB8	552 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	IER3IP1	Q9Y5U9	82 aa		10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.84	□□□□□ -0.67
PKN1-208	ENST00000586900	SH3D21	A4FU49	640 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	OR5H1	A6NKK0	313 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	ZNF99	A8MXY4	864 aa	Predicted RBP	10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	BHLHE40	O14503	412 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	XKRY	O14609	159 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	DHH	O43323	396 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	MGRN1	O60291	552 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	GOSR1	O95249	250 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	PPP1R3D	O95685	299 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	QDPR	P09417	244 aa		10.83	□□□□□ -0.68
PKN1-208	ENST00000586900	EPX	P11678	715 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms