RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 RELL2Q8NC24 303 aaPredicted RBP12.05□□□□□ -0.48
VMP1-203ENST00000586245 NOXO1Q8NFA2 376 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 ZNF519Q8TB69 540 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 ITLN2Q8WWU7 325 aaPredicted RBP12.05□□□□□ -0.48
VMP1-203ENST00000586245 RASD2Q96D21 266 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 LRRC46Q96FV0 321 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 LRR1Q96L50 414 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 SLC29A1Q99808 456 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 LINC00470Q9BZP3 86 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 RIBC2Q9H4K1 309 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 MYO7BQ6PIF6 2116 aa12.05□□□□□ -0.48
VMP1-203ENST00000586245 A8MXE2 369 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 CENPBD1B2RD01 187 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ARHGEF9O43307 516 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 CLDN14O95500 239 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 PGA4P0DJD7 388 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 PGA3P0DJD8 388 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 GIPRP48546 466 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ASCL1P50553 236 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 MYBPC1Q00872 1141 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 CD47Q08722 323 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 FAPQ12884 760 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 NPRL3Q12980 569 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ITGADQ13349 1161 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 FBXW9Q5XUX1 488 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ADCK1Q86TW2 530 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 C20orf196Q8IYI0 205 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 LNX2Q8N448 690 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 GALNT4Q8N4A0 578 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 IQCF1Q8N6M8 205 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 SYT14Q8NB59 555 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 OR4Q3Q8NH05 313 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 FNDC8Q8TC99 324 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 HDAC2Q92769 488 aaKnown RBP12.04□□□□□ -0.48
VMP1-203ENST00000586245 ALG12Q9BV10 488 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 RBM24Q9BX46 236 aaKnown RBP12.04□□□□□ -0.48
VMP1-203ENST00000586245 GABARAPL3Q9BY60 117 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 PRRG3Q9BZD7 231 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 SLC25A19Q9HC21 320 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 KCNJ16Q9NPI9 418 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
VMP1-203ENST00000586245 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 M0R3G1 203 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 AHCYL1O43865 530 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 UPK3AO75631 287 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 RENP00797 406 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 IFNGP01579 166 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 HMGN1P05114 100 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
VMP1-203ENST00000586245 EDNRAP25101 427 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 GRK5P34947 590 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 CDK5Q00535 292 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 RUNX1T1Q06455 604 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 PTGES3Q15185 160 aaKnown RBP12.03□□□□□ -0.48
VMP1-203ENST00000586245 ZIK1Q3SY52 487 aaPredicted RBP12.03□□□□□ -0.48
VMP1-203ENST00000586245 MESTQ5EB52 335 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 TMEM236Q5W0B7 351 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 Q6ZT83 130 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 WDFY1Q8IWB7 410 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 OR4K13Q8NH42 304 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 SSC4DQ8WTU2 575 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 TMEM54Q969K7 222 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 RDH12Q96NR8 316 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 ALKBH3Q96Q83 286 aaPredicted RBP12.03□□□□□ -0.48
VMP1-203ENST00000586245 RBP7Q96R05 134 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 MRPL13Q9BYD1 178 aaKnown RBP12.03□□□□□ -0.48
VMP1-203ENST00000586245 ELOVL5Q9NYP7 299 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 GLTPQ9NZD2 209 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 MALT1Q9UDY8 824 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 KLHL21Q9UJP4 597 aa12.03□□□□□ -0.48
VMP1-203ENST00000586245 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
VMP1-203ENST00000586245 HIVEP3Q5T1R4 2406 aa12.02□□□□□ -0.48
VMP1-203ENST00000586245 PRSS37A4D1T9 235 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 NKX2-6A6NCS4 301 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 RIIAD1A6NNX1 92 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 ZAR1LA6NP61 321 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 QDPRP09417 244 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 MPGP29372 298 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 ROR2Q01974 943 aaKnown RBP12.02□□□□□ -0.49
VMP1-203ENST00000586245 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.02□□□□□ -0.49
VMP1-203ENST00000586245 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 THEM4Q5T1C6 240 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 LEG1Q6P5S2 330 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 ZNF474Q6S9Z5 364 aaPredicted RBP12.02□□□□□ -0.49
VMP1-203ENST00000586245 SDR9C7Q8NEX9 313 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 PLEKHA8Q96JA3 519 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 SLC38A2Q96QD8 506 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 TOR3AQ9H497 397 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 CMC2Q9NRP2 79 aa12.02□□□□□ -0.49
VMP1-203ENST00000586245 SMPD3Q9NY59 655 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms