RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 ATP1B3P54709 279 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 TNFRSF17Q02223 184 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 PAX5Q02548 391 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 FGL1Q08830 312 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 VGLL4Q14135 290 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 GGTLC2Q14390 218 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 KLHL38Q2WGJ6 581 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 CFAP157Q5JU67 520 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 C1orf220Q5T0J3 134 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 ZFP2Q6ZN57 461 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 Q6ZPB1 254 aaPredicted RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 NBPF5PQ86XG9 351 aaPredicted RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 CCDC54Q8NEL0 328 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 IPMKQ8NFU5 416 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 OR2T3Q8NH03 318 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 OR6X1Q8NH79 312 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 RLN3Q8WXF3 142 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 EMG1Q92979 244 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 CXorf40BQ96DE9 158 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 FAM210BQ96KR6 192 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 TMEM246Q9BRR3 403 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 RTBDNQ9BSG5 229 aaPredicted RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 ZSCAN5AQ9BUG6 496 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 API5Q9BZZ5 524 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 DEFB127Q9H1M4 99 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 VCXQ9H320 206 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 BFARQ9NZS9 450 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 GNPTGQ9UJJ9 305 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 PTBP2Q9UKA9 531 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 RAB26Q9ULW5 256 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 DDX19BQ9UMR2 479 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 PSG11Q9UQ72 335 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 MRPS7Q9Y2R9 242 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 KCNIP3Q9Y2W7 256 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 MAP3K19Q56UN5 1328 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 TTC21AQ8NDW8 1320 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 RAI1Q7Z5J4 1906 aaPredicted RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 CPSF1Q10570 1443 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 EDC4Q6P2E9 1401 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 ADAMTS13Q76LX8 1427 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 DLC1Q96QB1 1528 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 NRXN3Q9Y4C0 1643 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 RIMS1Q86UR5 1692 aaKnown RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 AKAP12Q02952 1782 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 NKX2-6A6NCS4 301 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 H0YHG0 523 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 SNAI2O43623 268 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 MTX2O75431 263 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 ZNF44P15621 663 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 CNR1P21554 472 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 CMA1P23946 247 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 IL12AP29459 219 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 BTCP35070 178 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 LONP1P36776 959 aaKnown RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 IFNAR2P48551 515 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 ACTA1P68133 377 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 OXA1LQ15070 435 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 TAF7Q15545 349 aaPredicted RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 RFX4Q33E94 735 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 GALNT17Q6IS24 598 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 ZSCAN25Q6NSZ9 544 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 PMF1Q6P1K2 205 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 ZNF621Q6ZSS3 439 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 NLRP9Q7RTR0 991 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 OTUD6BQ8N6M0 293 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 NPBQ8NG41 125 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 ITFG2Q969R8 447 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 RPRD1AQ96P16 312 aaPredicted RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 NPAS2Q99743 824 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 PELOQ9BRX2 385 aaKnown RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 CLMPQ9H6B4 373 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 HEBP2Q9Y5Z4 205 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 PNPLA6Q8IY17 1366 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 ATP7BP35670 1465 aa2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 SETD1AO15047 1707 aaKnown RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 N4BP2Q86UW6 1770 aaPredicted RBP2.31□□□□□ -2.04
RPRD1A-203ENST00000585879 DLG5Q8TDM6 1919 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 GTF3C1Q12789 2109 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 A0A0G2JN53 185 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 NDC80O14777 642 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 ZNF208O43345 1280 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 PRKAB2O43741 272 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 TOM1O60784 492 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 ICOSLGO75144 302 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 SUPT3HO75486 399 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 ALDOBP05062 364 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 PNMA6AP0CW24 399 aaPredicted RBP2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 DBTP11182 482 aaKnown RBP2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 CCR1P32246 355 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 SLC26A3P40879 764 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 RPS9P46781 194 aaKnown RBP2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 CDK16Q00536 496 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 NCBP1Q09161 790 aaKnown RBP2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 OR5I1Q13606 314 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 ZSCAN26Q16670 478 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 SFT2D3Q587I9 215 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 PIGGQ5H8A4 983 aa2.3□□□□□ -2.04
RPRD1A-203ENST00000585879 CCDC183Q5T5S1 534 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms