RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 HIPK4Q8NE63 616 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 OR5J2Q8NH18 312 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 OR6X1Q8NH79 312 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 ZFAND2BQ8WV99 257 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 EBF4Q9BQW3 602 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 RACGAP1Q9H0H5 632 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 ZNF385DQ9H6B1 395 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 NPHS2Q9NP85 383 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 MRGBPQ9NV56 204 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 MED29Q9NX70 200 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 VAPAQ9P0L0 249 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 SLAMF8Q9P0V8 285 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 SLC7A8Q9UHI5 535 aa12.91□□□□□ -0.34
VAPA-209ENST00000585042 ZNF346Q9UL40 294 aaKnown RBP12.91□□□□□ -0.34
VAPA-209ENST00000585042 A0A0G2JND7 137 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 MGRN1O60291 552 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 TPST2O60704 377 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 SEC14L2O76054 403 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 MFN2O95140 757 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 TFP02787 698 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 PTDSS1P48651 473 aaKnown RBP12.9□□□□□ -0.34
VAPA-209ENST00000585042 CDH12P55289 794 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 RBBP4Q09028 425 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 CAMK2DQ13557 499 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 PAGE3Q5JUK9 113 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 GKAP1Q5VSY0 366 aaPredicted RBP12.9□□□□□ -0.34
VAPA-209ENST00000585042 METTL21CQ5VZV1 264 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 RNF217Q8TC41 542 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 TMEM54Q969K7 222 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 MOGAT1Q96PD6 335 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 TPK1Q9H3S4 243 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 CCDC167Q9P0B6 97 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 GPR160Q9UJ42 338 aa12.9□□□□□ -0.34
VAPA-209ENST00000585042 LYNX1G3V0Z9 82 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 CHP2O43745 196 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 OR6A2O95222 327 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 ADORA3P0DMS8 318 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 OR8G3PP0DMU2 310 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 LYNX1P0DP58 116 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 AHCYP23526 432 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 GPR6P46095 362 aaPredicted RBP12.89□□□□□ -0.35
VAPA-209ENST00000585042 GIPRP48546 466 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 CSNK1A1P48729 337 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 SELENOVP59797 346 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 SRSF2Q01130 221 aaKnown RBP12.89□□□□□ -0.35
VAPA-209ENST00000585042 TRIP10Q15642 601 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 MSMPQ1L6U9 139 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 NRN1LQ496H8 165 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 MEX3DQ86XN8 651 aaKnown RBP12.89□□□□□ -0.35
VAPA-209ENST00000585042 C10orf111Q8N326 155 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 C10orf53Q8N6V4 93 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
VAPA-209ENST00000585042 ZNF416Q9BWM5 594 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 C1orf198Q9H425 327 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 GLTPQ9NZD2 209 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 ANGPT4Q9Y264 503 aa12.89□□□□□ -0.35
VAPA-209ENST00000585042 PTHP01270 115 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 ANPEPP15144 967 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 B4GALT1P15291 398 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 COL8A2P25067 703 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 MDH1P40925 334 aaKnown RBP12.88□□□□□ -0.35
VAPA-209ENST00000585042 BIDP55957 195 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 PCBP3P57721 371 aaKnown RBP12.88□□□□□ -0.35
VAPA-209ENST00000585042 GUCY1A3Q02108 690 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 AGKQ53H12 422 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 DLEU7Q6UYE1 221 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 SLC35D2Q76EJ3 337 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 SLC22A24Q8N4F4 322 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 C11orf65Q8NCR3 313 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 TMEM186Q96B77 213 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
VAPA-209ENST00000585042 MCHR1Q99705 422 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 CCDC134Q9H6E4 229 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 NKIRAS2Q9NYR9 191 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 TAS2R5Q9NYW4 299 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 GRIP1Q9Y3R0 1128 aa12.88□□□□□ -0.35
VAPA-209ENST00000585042 FARS2O95363 451 aaKnown RBP12.87□□□□□ -0.35
VAPA-209ENST00000585042 HPXP02790 462 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 SAGP10523 405 aaPredicted RBP12.87□□□□□ -0.35
VAPA-209ENST00000585042 ITGA2P17301 1181 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 ALDH3B1P43353 468 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 RAB39AQ14964 217 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 MOGQ16653 247 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 RUNDC3AQ59EK9 446 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 TTC33Q6PID6 262 aaPredicted RBP12.87□□□□□ -0.35
VAPA-209ENST00000585042 LRFN4Q6PJG9 635 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 ZNF584Q8IVC4 421 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 SLC30A8Q8IWU4 369 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 CLDND2Q8NHS1 167 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 ARHGDIGQ99819 225 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 SYT3Q9BQG1 590 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 WFDC6Q9BQY6 131 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms