RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 UBTFL1P0CB47 393 aaPredicted RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 SLC2A3P11169 496 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 ETS2P15036 469 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 MAGP20916 626 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 SLC2A5P22732 501 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 IFNA8P32881 189 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 LONP1P36776 959 aaKnown RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 CCR6P51684 374 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 FGF8P55075 233 aaPredicted RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 ATP5IP56385 69 aaPredicted RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 BST2Q10589 180 aaKnown RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 SSX2Q16385 188 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 GUCA2BQ16661 112 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 ZNF691Q5VV52 312 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 LCN12Q6JVE5 192 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 IGFL3Q6UXB1 125 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 PSTKQ8IV42 348 aaKnown RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 Q8N976 141 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 OR2G2Q8NGZ5 317 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 LKAAEAR1Q8TD35 194 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 ACTRT1Q8TDG2 376 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 TMEM158Q8WZ71 300 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 STARD4Q96DR4 205 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 TCEANC2Q96MN5 208 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 TSSK3Q96PN8 268 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 DNTTIP1Q9H147 329 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 VCXQ9H320 206 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 CDC42EP4Q9H3Q1 356 aaKnown RBP2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 DEC1Q9P2X7 70 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 LRP4O75096 1905 aa2.42□□□□□ -2.02
PPP4R1-227ENST00000583988 IGKV2D-24A0A075B6R9 120 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 A0A1B0GVI7 797 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 SUPT3HO75486 399 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 MED6O75586 246 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 EIF3GO75821 320 aaKnown RBP eCLIP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 GAPDHP04406 335 aaKnown RBP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 KITLGP21583 273 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 RORAP35398 523 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 CXCL5P42830 114 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 PPIL2Q13356 520 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 EBI3Q14213 229 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 GK3PQ14409 553 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 TTLL9Q3SXZ7 439 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 PHYHD1Q5SRE7 291 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 ABHD13Q7L211 337 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 LHFPL3Q86UP9 236 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 THOC6Q86W42 341 aaKnown RBP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 NBPF5PQ86XG9 351 aaPredicted RBP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 CEP112Q8N8E3 955 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 OR10G4Q8NGN3 311 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 TSNARE1Q96NA8 513 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 TAAR1Q96RJ0 339 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 FMO2Q99518 471 aa2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 GCOM2Q9BZD3 368 aaPredicted RBP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 ROPN1BQ9BZX4 212 aaPredicted RBP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 CENPJQ9HC77 1338 aaPredicted RBP2.41□□□□□ -2.02
PPP4R1-227ENST00000583988 ARID1AO14497 2285 aa2.4□□□□□ -2.02
PPP4R1-227ENST00000583988 CEMIPQ8WUJ3 1361 aa2.4□□□□□ -2.02
PPP4R1-227ENST00000583988 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 SPAG7O75391 227 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 C1orf105O95561 183 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 C6orf47O95873 294 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF30P17039 623 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 IGFBP3P17936 291 aaPredicted RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 RDXP35241 583 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 ATP5C1P36542 298 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 RPS21P63220 83 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 KCNJ2P63252 427 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF92Q03936 586 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 DDX39BQ13838 428 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 VAX1Q5SQQ9 334 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 CNIH2Q6PI25 160 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 CCDC73Q6ZRK6 1079 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 TMEM179Q6ZVK1 233 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 C12orf56Q8IXR9 622 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 UBE2J2Q8N2K1 259 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 MREGQ8N565 214 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 NECAB1Q8N987 351 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 OR2L3Q8NG85 312 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 OR8J1Q8NGP2 316 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 GPR151Q8TDV0 419 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 SDR42E1Q8WUS8 393 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 GEMIN6Q8WXD5 167 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 SGK3Q96BR1 496 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 TUBGCP3Q96CW5 907 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 LRRC58Q96CX6 371 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 TPD52L3Q96J77 140 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 CEP170P1Q96L14 293 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 TMEM59Q9BXS4 323 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 PARP12Q9H0J9 701 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 CYTL1Q9NRR1 136 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 SLC2A8Q9NY64 477 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 OR12D3Q9UGF7 316 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 CD84Q9UIB8 345 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF223Q9UK11 482 aaPredicted RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 PSG11Q9UQ72 335 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms