RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 LOC102725191A0A1B0GVB3 256 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 IQCMA0A1B0GVH7 501 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 EXOC1LA0A1B0GW35 172 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 CLDN24A6NM45 220 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 XPNPEP2O43895 674 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 UBOX5O94941 541 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 SNAP29O95721 258 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 IGHV3-13P01766 116 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 TNFRSF1AP19438 455 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 MAKP20794 623 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 UQCRC2P22695 453 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 CHI3L1P36222 383 aaPredicted RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 DNAJB13P59910 316 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 BST1Q10588 318 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 MFSD13AQ14CX5 517 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 PGS1Q32NB8 556 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 ZNF718Q3SXZ3 478 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 SAMD5Q5TGI4 173 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 CARD17Q5XLA6 110 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 TNFAIP8L2Q6P589 184 aaPredicted RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 ZDHHC24Q6UX98 284 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 GDPGP1Q6ZNW5 385 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 Q6ZTK2 550 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 NET1Q7Z628 596 aaPredicted RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 C20orf196Q8IYI0 205 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 CCDC63Q8NA47 563 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 OR4A15Q8NGL6 344 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 LRTOMTQ8WZ04 291 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 MAGEB18Q96M61 343 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 ZNF75AQ96N20 296 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 TRNT1Q96Q11 434 aaKnown RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 DCLRE1CQ96SD1 692 aaKnown RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 GATA5Q9BWX5 397 aaPredicted RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 FN3KRPQ9HA64 309 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 SLC6A13Q9NSD5 602 aa9.38□□□□□ -0.91
CASC3-208ENST00000583649 EIF3KQ9UBQ5 218 aaKnown RBP9.38□□□□□ -0.91
CASC3-208ENST00000583649 CMYA5Q8N3K9 4069 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 RNASET2O00584 256 aaKnown RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 DHHO43323 396 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 PRB2P02812 416 aaPredicted RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 NQO1P15559 274 aaKnown RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 RPS5P46782 204 aaKnown RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 PROK1P58294 105 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 RELBQ01201 579 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 BNIP2Q12982 314 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 MAD2L1Q13257 205 aaPredicted RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 DOC2BQ14184 412 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 CCDC153Q494R4 210 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 SLC36A2Q495M3 483 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 ATG16L1Q676U5 607 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 C6orf89Q6UWU4 347 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 H1FNTQ75WM6 255 aaPredicted RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 OLIG3Q7RTU3 272 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 ZER1Q7Z7L7 766 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 JAZF1Q86VZ6 243 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 OR1J1Q8NGS3 322 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 OR2T11Q8NH01 316 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 PNPT1Q8TCS8 783 aaKnown RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 ZG16BQ96DA0 208 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 TSPAN32Q96QS1 320 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 SSBP3Q9BWW4 388 aaPredicted RBP9.37□□□□□ -0.91
CASC3-208ENST00000583649 OR51B6Q9H340 312 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 NPHS2Q9NP85 383 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 TBK1Q9UHD2 729 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
CASC3-208ENST00000583649 MDFIC2A0A1B0GVS7 189 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 BTBD17A6NE02 478 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 GLRA3O75311 464 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 IGHV1-46P01743 117 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 IGHV2-70P01814 119 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 ARRB2P32121 409 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 CD80P33681 288 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 APLNRP35414 380 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
CASC3-208ENST00000583649 BTG1P62324 171 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 GNB2P62879 340 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 GLO1Q04760 184 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 PTGR1Q14914 329 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 CHI3L2Q15782 390 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 LIN52Q52LA3 116 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 PDCD4Q53EL6 469 aaKnown RBP9.36□□□□□ -0.91
CASC3-208ENST00000583649 FAM69AQ5T7M9 428 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 ANXA8L1Q5VT79 327 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 LRRC74BQ6ZQY2 392 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 NLRC3Q7RTR2 1065 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 HMGN2P46Q86SG4 172 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 LRRC28Q86X40 367 aaPredicted RBP9.36□□□□□ -0.91
CASC3-208ENST00000583649 PTOV1Q86YD1 416 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 TMEM123Q8N131 208 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 MIER2Q8N344 545 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 TRIML2Q8N7C3 387 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 FNDC5Q8NAU1 212 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 RAB40AQ8WXH6 277 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 KCNN2Q9H2S1 579 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 DPAGT1Q9H3H5 408 aa9.36□□□□□ -0.91
CASC3-208ENST00000583649 TMEM106BQ9NUM4 274 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms