RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DBTP11182 482 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SDC1P18827 310 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 AHCYP23526 432 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PTBP1P26599 531 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GTF2E2P29084 291 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CCND3P30281 292 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GABRA5P31644 462 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 NUDT1P36639 197 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FRKP42685 505 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ACAA2P42765 397 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CDKN2CP42773 168 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 HNMTP50135 292 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ARPC4P59998 168 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SNRPEP62304 92 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SNRPGP62308 76 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 HMGCS1Q01581 520 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ST3GAL4Q11206 333 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF177Q13360 481 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ASAH1Q13510 395 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 DGCR6Q14129 220 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 RGNQ15493 299 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MICAQ29983 383 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRC26Q2I0M4 334 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 C18orf21Q32NC0 220 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GLYR1Q49A26 553 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 BCL7AQ4VC05 210 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 YIF1BQ5BJH7 314 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SPANXN2Q5MJ10 180 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC25A30Q5SVS4 291 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ANXA8L1Q5VT79 327 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 RSBN1Q5VWQ0 802 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MEDAGQ5VYS4 303 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 TIGD3Q6B0B8 471 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PTRHD1Q6GMV3 140 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FRMPD2BQ6IN97 320 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 NOXRED1Q6NXP6 359 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 XKRXQ6PP77 449 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ENPP7Q6UWV6 458 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 HSDL2Q6YN16 418 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM92BQ6ZTR7 304 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MOB2Q70IA6 237 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 AHSA2Q719I0 299 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 TAS2R42Q7RTR8 314 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRC70Q7Z2Q7 622 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 NANOGNBQ7Z5D8 188 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ZER1Q7Z7L7 766 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SERINC5Q86VE9 423 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SERPINA9Q86WD7 417 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 HORMAD1Q86X24 394 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 RAB43Q86YS6 212 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PLCZ1Q86YW0 608 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC22A15Q8IZD6 547 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 KDM8Q8N371 416 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 STX19Q8N4C7 294 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 RAB42Q8N4Z0 105 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GDPD1Q8N9F7 314 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 DUSP18Q8NEJ0 188 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 OR1J1Q8NGS3 322 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 OR4C3Q8NH37 302 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GRPEL2Q8TAA5 225 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 C2orf15Q8WU43 125 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PIH1D2Q8WWB5 315 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CAPSLQ8WWF8 208 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 HSD17B8Q92506 261 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SUSD6Q92537 303 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 NSMAFQ92636 917 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 KIAA1143Q96AT1 154 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 RNF170Q96K19 258 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SFXN2Q96NB2 322 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 FEVQ99581 238 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MGLLQ99685 303 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SOSTQ9BQB4 213 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC30A2Q9BRI3 323 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 DOHHQ9BU89 302 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 WNT5BQ9H1J7 359 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 OR51E2Q9H255 320 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PPIL3Q9H2H8 161 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM245Q9H330 911 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM38AQ9H6F2 299 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ISYNA1Q9NPH2 558 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 PRMT8Q9NR22 394 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 DIABLOQ9NR28 239 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 ACER3Q9NUN7 267 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 DNAJC11Q9NVH1 559 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 THUMPD1Q9NXG2 353 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SPG21Q9NZD8 308 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MUTYHQ9UIF7 546 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 STOML2Q9UJZ1 356 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 TBC1D24Q9ULP9 559 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 SPIN1Q9Y657 262 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CLCA3PQ9Y6N3 262 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CHD5Q8TDI0 1954 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 CASP8AP2Q9UKL3 1982 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 MICAL3Q7RTP6 2002 aa3.39□□□□□ -1.87
SMCHD1-208ENST00000583344 GREB1Q4ZG55 1949 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 IGLV3-16A0A075B6K0 115 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 IQCMA0A1B0GVH7 501 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 GABRR3A8MPY1 467 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms