RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CRHP06850 196 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 COX6B1P14854 86 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 MYL12AP19105 171 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ENPP1P22413 925 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 DCKP27707 260 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 PSMB9P28065 219 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 GTF2E2P29084 291 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 OR2B6P58173 313 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 PRPS1P60891 318 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 PMPCAQ10713 525 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 PMS2P3Q13401 168 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 MFSD13AQ14CX5 517 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF239Q16600 458 aaKnown RBP12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM236Q5W0B7 351 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 LAIR2Q6ISS4 152 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 OAFQ86UD1 273 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 MED12LQ86YW9 2145 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 OR9Q1Q8NGQ5 310 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 OR6S1Q8NH40 331 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 FNDC9Q8TBE3 224 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ASB5Q8WWX0 329 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ZNF845Q96IR2 970 aaPredicted RBP12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ARL5BQ96KC2 179 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 IL4I1Q96RQ9 567 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 NAA11Q9BSU3 229 aaPredicted RBP12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 EGLN3Q9H6Z9 239 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 GLRX2Q9NS18 164 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ERGIC3Q9Y282 383 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 CEPT1Q9Y6K0 416 aa12.03□□□□□ -0.48
CSNK1D-220ENST00000581737 ZC3H12DA2A288 527 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 KPNA4O00629 521 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 MYL12BO14950 172 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 TLX2O43763 284 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 NDUFB2O95178 105 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 LYPD3O95274 346 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 THY1P04216 161 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 TP53P04637 393 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 ZNF3P17036 446 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 AGAP20933 346 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 GSTT1P30711 240 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 CHRNB4P30926 498 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 CEACAM8P31997 349 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 EMX1Q04741 257 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 ST3GAL4Q11206 333 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 RAB40BQ12829 278 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 RNPS1Q15287 305 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 TIMM50Q3ZCQ8 353 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 FAM69AQ5T7M9 428 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 UBE2UQ5VVX9 321 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 FOXB2Q5VYV0 432 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 RNLSQ5VYX0 342 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 KIF18BQ86Y91 864 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 CCDC103Q8IW40 242 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 RPRMLQ8N4K4 120 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 ZNF808Q8N4W9 903 aaPredicted RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 C9orf106Q8NAJ2 232 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 MFSD8Q8NHS3 518 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 RNF128Q8TEB7 428 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 GGHQ92820 318 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 LRR1Q96L50 414 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 IFT27Q9BW83 186 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 SRXN1Q9BYN0 137 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 GP6Q9HCN6 339 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 ACOT13Q9NPJ3 140 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 KLHL21Q9UJP4 597 aa12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 INTS1Q8N201 2190 aaKnown RBP12.02□□□□□ -0.49
CSNK1D-220ENST00000581737 IGKV1D-42A0A075B6H8 117 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 LIPT2A6NK58 231 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 IDH3BO43837 385 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 ENTPD6O75354 484 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 OR7A10O76100 309 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 RAB36O95755 333 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 TGM6O95932 706 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 PLGP00747 810 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 HIST1H2ABP04908 130 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 HTR1AP08908 422 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 TMIGD3P0DMS9 266 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 DBTP11182 482 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 NOS3P29474 1203 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 CAPZA2P47755 286 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 AGFG1P52594 562 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 NUDT6P53370 316 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 ZNF91Q05481 1191 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 OR7A5Q15622 319 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 SMN1Q16637 294 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 CLEC12AQ5QGZ9 265 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 SYT6Q5T7P8 510 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 LCN1P1Q5VSP4 162 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 NXNL2Q5VZ03 156 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 XAF1Q6GPH4 301 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 XKRXQ6PP77 449 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 PAQR6Q6TCH4 344 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 LINC00114Q6XXX2 140 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 SEM1Q6ZVN7 128 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 NCCRP1Q6ZVX7 275 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 FCRLAQ7L513 359 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 HIST3H2AQ7L7L0 130 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms