RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 MRPL39Q9NYK5 338 aaKnown RBP18.18■□□□□ 0.5
CCDC42-203ENST00000581598 ANK3Q12955 4377 aaKnown RBP18.17■□□□□ 0.5
CCDC42-203ENST00000581598 AQP12BA6NM10 295 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 B9A039 149 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 M0QX08 132 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 SERPINF1P36955 418 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 CDH12P55289 794 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 SNRPD2P62316 118 aaKnown RBP18.17■□□□□ 0.5
CCDC42-203ENST00000581598 CEACAM16Q2WEN9 425 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 TMEM249Q2WGJ8 235 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 ZNF613Q6PF04 617 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 LINC00114Q6XXX2 140 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 AQP12AQ8IXF9 295 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 NUP37Q8NFH4 326 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 HTRA1Q92743 480 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 FAM162AQ96A26 154 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 ASPNQ9BXN1 380 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 TRIM15Q9C019 465 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 DCAF13Q9NV06 445 aaKnown RBP18.17■□□□□ 0.5
CCDC42-203ENST00000581598 FBXO9Q9UK97 447 aaPredicted RBP18.17■□□□□ 0.5
CCDC42-203ENST00000581598 NOX1Q9Y5S8 564 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 FKBP7Q9Y680 259 aa18.17■□□□□ 0.5
CCDC42-203ENST00000581598 TCRBV5S2A0A599 114 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 A8MV72 311 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 ZNF99A8MXY4 864 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 GPRIN2O60269 458 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 STAMBPO95630 424 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 HPRP00739 348 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 IFNA14P01570 189 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 CALCRP30988 508 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 ARR3P36575 388 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 TUBA1BP68363 451 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 TUBA4AP68366 448 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 ADIPOQQ15848 244 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 LRRC23Q53EV4 343 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 CYP2R1Q6VVX0 501 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 TUBA1AQ71U36 451 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 CBLL1Q75N03 491 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 ZNF627Q7L945 461 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 C20orf196Q8IYI0 205 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 NANOS1Q8WY41 292 aaKnown RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 ZNF837Q96EG3 531 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 MCHR1Q99705 422 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 PLK3Q9H4B4 646 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 DENND2DQ9H6A0 471 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 ZNF442Q9H7R0 627 aa18.16■□□□□ 0.5
CCDC42-203ENST00000581598 MYOZ1Q9NP98 299 aaPredicted RBP18.16■□□□□ 0.5
CCDC42-203ENST00000581598 TCRBV3S1A0A5B6 114 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 NDUFS8O00217 210 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 CHP2O43745 196 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 MT-ATP6P00846 226 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 SERPINA1P01009 418 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 CD247P20963 164 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 CBLP22681 906 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 ACTR3P61158 418 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 IL1RL1Q01638 556 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 PUDPQ08623 228 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 CCNIQ14094 377 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 DUSP7Q16829 419 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 CYBRD1Q53TN4 286 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 C6orf52Q5T4I8 152 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 PXKQ7Z7A4 578 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 SMYD1Q8NB12 490 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 IL17RDQ8NFM7 739 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 RNF217Q8TC41 542 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 POP5Q969H6 163 aaKnown RBP18.15■□□□□ 0.5
CCDC42-203ENST00000581598 MOGAT1Q96PD6 335 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 SORCS2Q96PQ0 1159 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 TMEM160Q9NX00 188 aa18.15■□□□□ 0.5
CCDC42-203ENST00000581598 ATRQ13535 2644 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 VWC2LB2RUY7 222 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 PLPP3O14495 311 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 HLA-DOBP13765 273 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 PDLIM4P50479 330 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 POU3F1Q03052 451 aaPredicted RBP18.14■□□□□ 0.49
CCDC42-203ENST00000581598 HGFACQ04756 655 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 PMS2P3Q13401 168 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 KPNB1Q14974 876 aaKnown RBP18.14■□□□□ 0.49
CCDC42-203ENST00000581598 PHYHD1Q5SRE7 291 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 GPR32P1Q8NGA4 272 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 LRGUKQ96M69 825 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 SEC61A2Q9H9S3 476 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 B3GAT2Q9NPZ5 323 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 RPS6KA6Q9UK32 745 aa18.14■□□□□ 0.49
CCDC42-203ENST00000581598 SAMD4AQ9UPU9 718 aaKnown RBP18.14■□□□□ 0.49
CCDC42-203ENST00000581598 FBN1P35555 2871 aaKnown RBP18.13■□□□□ 0.49
CCDC42-203ENST00000581598 RTTNQ86VV8 2226 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 SLC35F4A4IF30 521 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 ZNF503-AS2A6NEH8 195 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 M0R3G1 203 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 M0R3H8 397 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 OPN1SWP03999 348 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 OR4A8P0C604 315 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 USF1P22415 310 aaPredicted RBP18.13■□□□□ 0.49
CCDC42-203ENST00000581598 PPOXP50336 477 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 NPTX1Q15818 432 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 MYPOPQ86VE0 399 aaPredicted RBP18.13■□□□□ 0.49
CCDC42-203ENST00000581598 OR6T1Q8NGN1 323 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 OR5J2Q8NH18 312 aa18.13■□□□□ 0.49
CCDC42-203ENST00000581598 RASSF5Q8WWW0 418 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms