RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 UMPSP11172 480 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 CD247P20963 164 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 GIPRP48546 466 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 ZP4Q12836 540 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 NFYCQ13952 458 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 CR1LQ2VPA4 569 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 DLEU7Q6UYE1 221 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 SLC35D2Q76EJ3 337 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 HDDC2Q7Z4H3 204 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 ADAMTS16Q8TE57 1224 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 ZNF566Q969W8 418 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 CGREF1Q99674 301 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 SIKE1Q9BRV8 207 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 RSPO3Q9BXY4 272 aaPredicted RBP11.72□□□□□ -0.53
PGAP3-207ENST00000580898 TPK1Q9H3S4 243 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 MRGBPQ9NV56 204 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 GLTPQ9NZD2 209 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 ZNF229Q9UJW7 825 aa11.72□□□□□ -0.53
PGAP3-207ENST00000580898 SONP18583 2426 aaKnown RBP11.72□□□□□ -0.53
PGAP3-207ENST00000580898 LRP5LA4QPB2 252 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 HMGB1P1B2RPK0 211 aaPredicted RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 LRRN3E7EW58 273 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 TPST2O60704 377 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 CH25HO95992 272 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 OPN1SWP03999 348 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 ZNF35P13682 527 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 SRP14P37108 136 aaKnown RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 MTPNP58546 118 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 RIN1Q13671 783 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 ZNF74Q16587 644 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 DUSP7Q16829 419 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 TMEM53Q6P2H8 277 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 LINC00114Q6XXX2 140 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 NANOGNBQ7Z5D8 188 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 PTOV1Q86YD1 416 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 ZCCHC24Q8N2G6 241 aaKnown RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 OR6T1Q8NGN1 323 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 VANGL1Q8TAA9 524 aaPredicted RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 TMEM54Q969K7 222 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 SLC25A44Q96H78 314 aaPredicted RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 MAGEB18Q96M61 343 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 SNX18Q96RF0 628 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 SH3GL1Q99961 368 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 MRPL37Q9BZE1 423 aaKnown RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 TMEFF2Q9UIK5 374 aaPredicted RBP11.71□□□□□ -0.53
PGAP3-207ENST00000580898 SLC7A7Q9UM01 511 aa11.71□□□□□ -0.53
PGAP3-207ENST00000580898 A0A1W2PPW3 197 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 MCIDASD6RGH6 385 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 MGRN1O60291 552 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 LILRA1O75019 489 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 BCL10O95999 233 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 IGHG1P01857 330 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 SERPINA5P05154 406 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 ACHEP22303 614 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 PCGF2P35227 344 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 GPR6P46095 362 aaPredicted RBP11.7□□□□□ -0.54
PGAP3-207ENST00000580898 ZNF84P51523 738 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 CLRN1P58418 232 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 RAB39AQ14964 217 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 NPTX1Q15818 432 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 KRTAP24-1Q3LI83 254 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 SLC36A2Q495M3 483 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 NRN1LQ496H8 165 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 SLC22A24Q8N4F4 322 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 RFLNBQ8N5W9 214 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 SNX33Q8WV41 574 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 RDH5Q92781 318 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 ZNF75AQ96N20 296 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 SYT3Q9BQG1 590 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 POLR2J2Q9GZM3 115 aaKnown RBP11.7□□□□□ -0.54
PGAP3-207ENST00000580898 POLR2J3Q9H1A7 115 aaKnown RBP11.7□□□□□ -0.54
PGAP3-207ENST00000580898 LRMDAQ9H2I8 198 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 KAT8Q9H7Z6 458 aaKnown RBP11.7□□□□□ -0.54
PGAP3-207ENST00000580898 RNF121Q9H920 327 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 STX18Q9P2W9 335 aaKnown RBP11.7□□□□□ -0.54
PGAP3-207ENST00000580898 CUBNO60494 3623 aa11.7□□□□□ -0.54
PGAP3-207ENST00000580898 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 FBN3Q75N90 2809 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 A0A1W2PRG6 482 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 CENPBD1B2RD01 187 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 B4DSR2 109 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 KPNA4O00629 521 aaPredicted RBP11.69□□□□□ -0.54
PGAP3-207ENST00000580898 DHHO43323 396 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 TFP02787 698 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 NR2C1P13056 603 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 DAP3P51398 398 aaKnown RBP11.69□□□□□ -0.54
PGAP3-207ENST00000580898 DVL1P1P54792 670 aaPredicted RBP11.69□□□□□ -0.54
PGAP3-207ENST00000580898 CDH15P55291 814 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 MRPS11P82912 194 aaKnown RBP11.69□□□□□ -0.54
PGAP3-207ENST00000580898 PLP2Q04941 152 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 CYLC2Q14093 348 aaPredicted RBP11.69□□□□□ -0.54
PGAP3-207ENST00000580898 FXNQ16595 210 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 NKPD1Q17RQ9 610 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 TBC1D28Q2M2D7 210 aa11.69□□□□□ -0.54
PGAP3-207ENST00000580898 MMEL1Q495T6 779 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms