RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 KLHL9Q9P2J3 617 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 P2RX2Q9UBL9 471 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 CHRNA9Q9UGM1 479 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 SLC35A3Q9Y2D2 325 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 GPR52Q9Y2T5 361 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 NOSIPQ9Y314 301 aaKnown RBP3.47□□□□□ -1.85
DDX42-211ENST00000580108 RNF115Q9Y4L5 304 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 SPEF1Q9Y4P9 236 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 MAGED1Q9Y5V3 778 aaPredicted RBP3.47□□□□□ -1.85
DDX42-211ENST00000580108 FLVCR1Q9Y5Y0 555 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 ABCA1O95477 2261 aa3.47□□□□□ -1.85
DDX42-211ENST00000580108 ANK3Q12955 4377 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 RTTNQ86VV8 2226 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 IGKV1D-42A0A075B6H8 117 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 IGKV3D-15A0A087WSY6 115 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 A0A096LPI6 279 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 A0A1B0GWA3 101 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 CIB4A0PJX0 185 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 LIPT2A6NK58 231 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 CCT8L1PA6NM43 557 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 LINC01548A6NM66 108 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GJE1A6NN92 205 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 INAFM1C9JVW0 142 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 FTCDNL1E5RQL4 147 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 E7EQL1 145 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 M0R3H8 397 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PDLIM1O00151 329 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ABCD4O14678 606 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 POLR3GO15318 223 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 TPST2O60704 377 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 SHOX2O60902 331 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 ERLIN1O75477 346 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 UPK3AO75631 287 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PGM3O95394 542 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 KRT75O95678 551 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 LGI1O95970 557 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 AGR2O95994 175 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 DBIP07108 87 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 DANCRP0C864 163 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PABPC4LP0CB38 370 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 HLA-DOBP13765 273 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 IDO1P14902 403 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 H2AFXP16104 143 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 IL7RP16871 459 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 NCF2P19878 526 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 TNFRSF1BP20333 461 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 CXCR1P25024 350 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 IDUAP35475 653 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ACVR1BP36896 505 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 APOBEC1P41238 236 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 SLC1A3P43003 542 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 RPS5P46782 204 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 POLR2HP52434 150 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 SLC18A1P54219 525 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 CDH11P55287 796 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 MTPNP58546 118 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 CSNK2A1P68400 391 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 SLC35A1P78382 337 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 IRX1P78414 480 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 H3F3AP84243 136 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 EGR4Q05215 589 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ITGADQ13349 1161 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 TNK1Q13470 666 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 VEZF1Q14119 521 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 SLC17A1Q14916 467 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PPA1Q15181 289 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 NPTX1Q15818 432 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GABRA6Q16445 453 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GSTA3Q16772 222 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PGGHGQ32M88 737 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ZNF672Q499Z4 452 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 LIN52Q52LA3 116 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 ZNF311Q5JNZ3 666 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GCNT6Q5T4J0 391 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 EEF1A1P5Q5VTE0 462 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 C1orf140Q5VVS0 124 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 CARD17Q5XLA6 110 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 FBXW9Q5XUX1 488 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 C11orf87Q6NUJ2 197 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 DLEU7Q6UYE1 221 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 WDR88Q6ZMY6 472 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 Q6ZT83 130 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 DHDDSQ86SQ9 333 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GPAT4Q86UL3 456 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 MEX3DQ86XN8 651 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 PTOV1Q86YD1 416 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 RBM45Q8IUH3 476 aaKnown RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 EPHX4Q8IUS5 362 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 PEX5LQ8IYB4 626 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 SLC43A2Q8N370 569 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 SMYD1Q8NB12 490 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 VPS37AQ8NEZ2 397 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 STEAP2Q8NFT2 490 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 GPR32P1Q8NGA4 272 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 OR9K2Q8NGE7 335 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 VANGL1Q8TAA9 524 aaPredicted RBP3.46□□□□□ -1.86
DDX42-211ENST00000580108 LRRC8CQ8TDW0 803 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 TMEM171Q8WVE6 324 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 APH1AQ96BI3 265 aa3.46□□□□□ -1.86
DDX42-211ENST00000580108 C18orf12Q96KH6 178 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms