RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 MEP1BQ16820 701 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 GSG1Q2KHT4 349 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 LRRN1Q6UXK5 716 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 DBX2Q6ZNG2 339 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 MDGA2Q7Z553 956 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 TEX19Q8NA77 164 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 OR5AK2Q8NH90 309 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 SEC22CQ9BRL7 303 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 NUDT9Q9BW91 350 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 GTPBP2Q9BX10 602 aaKnown RBP9.51□□□□□ -0.89
TOP3A-209ENST00000580095 OR11A1Q9GZK7 315 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 TCF7L1Q9HCS4 588 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 LAMP5Q9UJQ1 280 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 PLCL2Q9UPR0 1127 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 CAMK2AQ9UQM7 478 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 PCNX3Q9H6A9 2034 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 TRIOBPQ9H2D6 2365 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 LRP4O75096 1905 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF749O43361 778 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 KHDRBS3O75525 346 aaKnown RBP9.51□□□□□ -0.89
TOP3A-209ENST00000580095 UPK3AO75631 287 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 CDK2P24941 298 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 DPP4P27487 766 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 CSNK1EP49674 416 aaKnown RBP9.51□□□□□ -0.89
TOP3A-209ENST00000580095 SELENOPP49908 381 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 HSD17B7P56937 341 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 BTG1P62324 171 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 NSDHLQ15738 373 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 RAB30Q15771 203 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 UBE2NLQ5JXB2 153 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-209ENST00000580095 STAC2Q6ZMT1 411 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 GLB1L2Q8IW92 636 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF676Q8N7Q3 588 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 SMIM4Q8WVI0 70 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 RBM14Q96PK6 669 aaKnown RBP9.51□□□□□ -0.89
TOP3A-209ENST00000580095 NPAS1Q99742 590 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 GON7Q9BXV9 100 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 CUTCQ9NTM9 273 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 MYEF2Q9P2K5 600 aaKnown RBP9.51□□□□□ -0.89
TOP3A-209ENST00000580095 FKBP7Q9Y680 259 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 V9GY05 133 aa9.51□□□□□ -0.89
TOP3A-209ENST00000580095 AIPO00170 330 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 GPR171O14626 319 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 WNT11O96014 354 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 S100A6P06703 90 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 SDHAP31040 664 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 UQCRC1P31930 480 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 CCR5P51681 352 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 PSMD4P55036 377 aaKnown RBP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 TMEM69Q5SWH9 247 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ZNF684Q5T5D7 378 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 FNDC7Q5VTL7 733 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 SLC25A25Q6KCM7 469 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 LANCL3Q6ZV70 420 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 OVCH1Q7RTY7 1134 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 PLCZ1Q86YW0 608 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 OR11G2Q8NGC1 345 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 NSMAFQ92636 917 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 TMEM106AQ96A25 262 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 C20orf85Q9H1P6 137 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 HRASLSQ9HDD0 168 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 SLC22A13Q9Y226 551 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 HIF3AQ9Y2N7 669 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 NUBP2Q9Y5Y2 271 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 IGHV1OR15-9A0A0B4J2B8 117 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 C7orf66A4D0T2 115 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 TOR1AO14656 332 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ARPC1BO15143 372 aaKnown RBP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 GATBO75879 557 aaKnown RBP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ASAH2BP0C7U1 165 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ANXA7P20073 488 aaKnown RBP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 PTH2RP49190 550 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 EFNB2P52799 333 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ZP1P60852 638 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 SKP1P63208 163 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 PITPNAQ00169 270 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ELOCQ15369 112 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 COL13A1Q5TAT6 717 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 ALKBH2Q6NS38 261 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 PWWP2BQ6NUJ5 590 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 FAM220AQ7Z4H9 259 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 SLC35F3Q8IY50 421 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 LRRC75AQ8NAA5 344 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 HYLS1Q96M11 299 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 METTL17Q9H7H0 456 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-209ENST00000580095 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 PRODH2Q9UF12 536 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 THADAQ6YHU6 1953 aa9.5□□□□□ -0.89
TOP3A-209ENST00000580095 TRIM3O75382 744 aaPredicted RBP9.49□□□□□ -0.89
TOP3A-209ENST00000580095 MPZL1O95297 269 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 HIST1H2ABP04908 130 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 ANXA3P12429 323 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 CD38P28907 300 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 RAD52P43351 418 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 CCR9P51686 369 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 ARHGDIBP52566 201 aa9.49□□□□□ -0.89
TOP3A-209ENST00000580095 OC90Q02509 493 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms