RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
GGA3-208ENST00000579743 ZNF346Q9UL40 294 aaKnown RBP11.86□□□□□ -0.51
GGA3-208ENST00000579743 ATRQ13535 2644 aa11.86□□□□□ -0.51
GGA3-208ENST00000579743 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 M0R3H8 397 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 MGRN1O60291 552 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 CH25HO95992 272 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 BCL10O95999 233 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 OPN1SWP03999 348 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 APEX1P27695 318 aaKnown RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 IFNA8P32881 189 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 PCGF2P35227 344 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 GIPRP48546 466 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 ZNF84P51523 738 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 PCBP3P57721 371 aaKnown RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 MTPNP58546 118 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 PLP2Q04941 152 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 ZP4Q12836 540 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 NPTX1Q15818 432 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 DUSP7Q16829 419 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 TMEM53Q6P2H8 277 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 NANOGNBQ7Z5D8 188 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 LSRQ86X29 649 aaPredicted RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 C10orf111Q8N326 155 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 VANGL1Q8TAA9 524 aaPredicted RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 SLC25A44Q96H78 314 aaPredicted RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 ARHGDIGQ99819 225 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 ECSITQ9BQ95 431 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 KAT8Q9H7Z6 458 aaKnown RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 RNF121Q9H920 327 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 STX18Q9P2W9 335 aaKnown RBP11.85□□□□□ -0.51
GGA3-208ENST00000579743 SLC7A8Q9UHI5 535 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 ZNF229Q9UJW7 825 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 BAG5Q9UL15 447 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 SLC7A7Q9UM01 511 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 COL6A5A8TX70 2615 aa11.85□□□□□ -0.51
GGA3-208ENST00000579743 A0A0G2JND7 137 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 A0A1W2PRG6 482 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 MCIDASD6RGH6 385 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 TPST2O60704 377 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 IGHG1P01857 330 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 NR2C1P13056 603 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 ZNF14P17017 642 aaPredicted RBP11.84□□□□□ -0.51
GGA3-208ENST00000579743 IGFBP5P24593 272 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
GGA3-208ENST00000579743 CLRN1P58418 232 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 ZNF74Q16587 644 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 MOGQ16653 247 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 SLC36A2Q495M3 483 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 MMEL1Q495T6 779 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 PHYHD1Q5SRE7 291 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 PTOV1Q86YD1 416 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 SLC22A24Q8N4F4 322 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 LINC01356Q8N9X3 169 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 OR6T1Q8NGN1 323 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 OR1J2Q8NGS2 313 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 OR10A6Q8NH74 314 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 POLR2J2Q9GZM3 115 aaKnown RBP11.84□□□□□ -0.51
GGA3-208ENST00000579743 POLR2J3Q9H1A7 115 aaKnown RBP11.84□□□□□ -0.51
GGA3-208ENST00000579743 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
GGA3-208ENST00000579743 YLPM1P49750 1951 aaKnown RBP11.83□□□□□ -0.52
GGA3-208ENST00000579743 IQCMA0A1B0GVH7 501 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 A0A1W2PPW3 197 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 LRRN3E7EW58 273 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 BLOC1S5-TXNDC5H3BN57 136 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 NPPAP01160 153 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 MT-ND5P03915 603 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 SERPINA5P05154 406 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 TACSTD2P09758 323 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 ZNF35P13682 527 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 DAP3P51398 398 aaKnown RBP11.83□□□□□ -0.52
GGA3-208ENST00000579743 SCGB2A2Q13296 93 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 VMACQ2NL98 169 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 TTMPQ5BVD1 217 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 UNQ6126/PRO20091Q6UXV3 157 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 MYPOPQ86VE0 399 aaPredicted RBP11.83□□□□□ -0.52
GGA3-208ENST00000579743 PHC2Q8IXK0 858 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 CDK20Q8IZL9 346 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 SNX33Q8WV41 574 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 THOC1Q96FV9 657 aaKnown RBP11.83□□□□□ -0.52
GGA3-208ENST00000579743 SNX18Q96RF0 628 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 VIPAS39Q9H9C1 493 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 DUSP13Q9UII6 198 aa11.83□□□□□ -0.52
GGA3-208ENST00000579743 TMEM129A0AVI4 362 aa11.82□□□□□ -0.52
GGA3-208ENST00000579743 LRP5LA4QPB2 252 aa11.82□□□□□ -0.52
GGA3-208ENST00000579743 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
GGA3-208ENST00000579743 CENPBD1B2RD01 187 aa11.82□□□□□ -0.52
GGA3-208ENST00000579743 KPNA4O00629 521 aaPredicted RBP11.82□□□□□ -0.52
GGA3-208ENST00000579743 DHHO43323 396 aa11.82□□□□□ -0.52
GGA3-208ENST00000579743 TROVE2P10155 538 aaKnown RBP eCLIP11.82□□□□□ -0.52
GGA3-208ENST00000579743 RBM34P42696 430 aaKnown RBP11.82□□□□□ -0.52
GGA3-208ENST00000579743 GUCA1AP43080 201 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms