RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 M0R129 80 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 PRODHO43272 600 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 SS18L1O75177 396 aaPredicted RBP9.54□□□□□ -0.88
SS18-213ENST00000579640 SLC43A1O75387 559 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 WBP4O75554 376 aaKnown RBP9.54□□□□□ -0.88
SS18-213ENST00000579640 ZNF432O94892 652 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 CRHP06850 196 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 PGA4P0DJD7 388 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 PGA3P0DJD8 388 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 TIMP3P35625 211 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 CLRN1P58418 232 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 LGALS3BPQ08380 585 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 TMED1Q13445 227 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 AADACL4Q5VUY2 407 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 NIPAL3Q6P499 406 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 PLBD1Q6P4A8 553 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 DNM1P34Q6PK57 102 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 RPTNQ6XPR3 784 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 B3GNT6Q6ZMB0 384 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 TUSC5Q8IXB3 177 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 NOXO1Q8NFA2 376 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 OR2T4Q8NH00 348 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 CNIH3Q8TBE1 160 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 APH1BQ8WW43 257 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 RBP7Q96R05 134 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 OR2M2Q96R28 347 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 EMC6Q9BV81 110 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 YTHDF1Q9BYJ9 559 aaKnown RBP9.54□□□□□ -0.88
SS18-213ENST00000579640 NMNAT2Q9BZQ4 307 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 UBAP1Q9NZ09 502 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.54□□□□□ -0.88
SS18-213ENST00000579640 FKBP7Q9Y680 259 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 SVILO95425 2214 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 SPTA1P02549 2419 aa9.54□□□□□ -0.88
SS18-213ENST00000579640 ITPR1Q14643 2758 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 SLC22A23A1A5C7 686 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 FAM183AA6NL82 134 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 MRPL33O75394 65 aaKnown RBP9.53□□□□□ -0.88
SS18-213ENST00000579640 CRABP1P29762 137 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 CSNK1A1P48729 337 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 CENPAP49450 140 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 CASP6P55212 293 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 RUNX1T1Q06455 604 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 CAMK2DQ13557 499 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 SLC35D3Q5M8T2 416 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 RBM48Q5RL73 367 aaKnown RBP9.53□□□□□ -0.88
SS18-213ENST00000579640 C6orf141Q5SZD1 244 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 THEM4Q5T1C6 240 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 RTL6Q6ICC9 239 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 DOLPP1Q86YN1 238 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 TMEM123Q8N131 208 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 C9orf106Q8NAJ2 232 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 CYB561A3Q8NBI2 242 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 PTP4A1Q93096 173 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 TMEM54Q969K7 222 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 OTULINQ96BN8 352 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 ZNF582Q96NG8 517 aaPredicted RBP9.53□□□□□ -0.88
SS18-213ENST00000579640 NR1H4Q96RI1 486 aaPredicted RBP9.53□□□□□ -0.88
SS18-213ENST00000579640 SYT4Q9H2B2 425 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 PLCXD1Q9NUJ7 323 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 DNAJC27Q9NZQ0 273 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 BLOC1S6Q9UL45 172 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 MOKQ9UQ07 419 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 EMC9Q9Y3B6 208 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 FAM215AQ9Y5M1 114 aa9.53□□□□□ -0.88
SS18-213ENST00000579640 SLC22A31A6NKX4 558 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 H7C1C5 153 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 ENTPD6O75354 484 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 CCDC159P0C7I6 412 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 AGTR1P30556 359 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 HTR1FP30939 366 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 SELENOPP49908 381 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 BLVRAP53004 296 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 CDH11P55287 796 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 LCN6P62502 163 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 GUSBP1Q15486 140 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 HIST3H3Q16695 136 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 LCN1P1Q5VSP4 162 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 PLXDC2Q6UX71 529 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 MEPCEQ7L2J0 689 aaKnown RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 FAM214BQ7L5A3 538 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 ZBTB46Q86UZ6 589 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 C20orf196Q8IYI0 205 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 ZNF786Q8N393 782 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 OR6N1Q8NGY5 312 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 RACGAP1Q9H0H5 632 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 B3GAT2Q9NPZ5 323 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 RPRD1BQ9NQG5 326 aaKnown RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 ASB6Q9NWX5 421 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 SCN3BQ9NY72 215 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 GLTPQ9NZD2 209 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 WARS2Q9UGM6 360 aaKnown RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 FOXD3Q9UJU5 478 aaPredicted RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 CLEC4AQ9UMR7 237 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 RPL36Q9Y3U8 105 aaKnown RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 ARHGAP21Q5T5U3 1957 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 KHDRBS3O75525 346 aaKnown RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 IL2RAP01589 272 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 SPI1P17947 270 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 SLC2A5P22732 501 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms