RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 CCDC36Q8IYA8 594 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 SLC7A13Q8TCU3 470 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 IGFBPL1Q8WX77 278 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 ASB10Q8WXI3 467 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 MUC13Q9H3R2 512 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 CISD1Q9NZ45 108 aaKnown RBP20.89■□□□□ 0.93
LIMD2-207ENST00000579329 ACTR3BQ9P1U1 418 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 STX18Q9P2W9 335 aaKnown RBP20.89■□□□□ 0.93
LIMD2-207ENST00000579329 POU2F3Q9UKI9 436 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 TMEM5Q9Y2B1 443 aa20.89■□□□□ 0.93
LIMD2-207ENST00000579329 NPIPB13A6NJU9 1138 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 NPIPB4C9JG80 1138 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 SEC14L2O76054 403 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 PGA4P0DJD7 388 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 PGA3P0DJD8 388 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 LAPTM4AQ15012 233 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 PODNL1Q6PEZ8 512 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 TBPL2Q6SJ96 375 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 ZNF813Q6ZN06 617 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 ZNF627Q7L945 461 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 LRRC75A-AS1Q8N1F1 130 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 FAM169BQ8N8A8 192 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 DHRS1Q96LJ7 313 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 SLC38A2Q96QD8 506 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 FOXB1Q99853 325 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 CRNNQ9UBG3 495 aaPredicted RBP20.88■□□□□ 0.93
LIMD2-207ENST00000579329 PRPF19Q9UMS4 504 aaKnown RBP20.88■□□□□ 0.93
LIMD2-207ENST00000579329 DSCAMO60469 2012 aa20.88■□□□□ 0.93
LIMD2-207ENST00000579329 CENPBD1B2RD01 187 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 DIRAS1O95057 198 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 GPR4P46093 362 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 CLRN1P58418 232 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 SMIM11AP58511 58 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 TAF11Q15544 211 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 C3orf36Q3SXR2 165 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 IQCCQ4KMZ1 466 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 MTX3Q5HYI7 312 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 TMPRSS11FQ6ZWK6 438 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 OAFQ86UD1 273 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 MEX3DQ86XN8 651 aaKnown RBP20.87■□□□□ 0.93
LIMD2-207ENST00000579329 NOXO1Q8NFA2 376 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 OR13C2Q8NGS9 318 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 SMAP2Q8WU79 429 aaPredicted RBP20.87■□□□□ 0.93
LIMD2-207ENST00000579329 C1orf21Q9H246 121 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 CXorf56Q9H5V9 222 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 LAMP3Q9UQV4 416 aa20.87■□□□□ 0.93
LIMD2-207ENST00000579329 TRAV27A0A087WT01 109 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 IGHV1-18A0A0C4DH31 117 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 FABP3P05413 133 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 DANCRP0C864 163 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 ACADSP16219 412 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 ATP6V1B2P21281 511 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 CAPZA2P47755 286 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 CYP2R1Q6VVX0 501 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 OR51A7Q8NH64 312 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 TXNIPQ9H3M7 391 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 KRCC1Q9NPI7 259 aaPredicted RBP20.86■□□□□ 0.93
LIMD2-207ENST00000579329 FAIMQ9NVQ4 179 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 TAS2R1Q9NYW7 299 aa20.86■□□□□ 0.93
LIMD2-207ENST00000579329 TRBV4-1A0A0J9YWV2 114 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 DHHO43323 396 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 TRMUO75648 421 aaKnown RBP20.85■□□□□ 0.93
LIMD2-207ENST00000579329 PDE5AO76074 875 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 B4GALT1P15291 398 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 CBR1P16152 277 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 NKX6-1P78426 367 aaPredicted RBP20.85■□□□□ 0.93
LIMD2-207ENST00000579329 SPIBQ01892 262 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 TOP3AQ13472 1001 aaPredicted RBP20.85■□□□□ 0.93
LIMD2-207ENST00000579329 ARMC4Q5T2S8 1044 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 LRFN4Q6PJG9 635 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 LRRC75AQ8NAA5 344 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 NANOS1Q8WY41 292 aaKnown RBP20.85■□□□□ 0.93
LIMD2-207ENST00000579329 TNFRSF13CQ96RJ3 184 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 SEPHS2Q99611 448 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 KCNS3Q9BQ31 491 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 KATNB1Q9BVA0 655 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 MRPL13Q9BYD1 178 aaKnown RBP20.85■□□□□ 0.93
LIMD2-207ENST00000579329 GSX2Q9BZM3 304 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 IL1RAPQ9NPH3 570 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 CADP27708 2225 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 ALPK2Q86TB3 2170 aa20.85■□□□□ 0.93
LIMD2-207ENST00000579329 E7EQL1 145 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 CDC42EP2O14613 210 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 ARHGEF9O43307 516 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 ENTPD5O75356 428 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 GADD45GO95257 159 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 IGKV3-15P01624 115 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 IGLV1-44P01699 117 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 IGHMP01871 453 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 SOD3P08294 240 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 QDPRP09417 244 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 HOXB4P17483 251 aaPredicted RBP20.84■□□□□ 0.93
LIMD2-207ENST00000579329 ARR3P36575 388 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 CTXN1P60606 82 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 RUNX1T1Q06455 604 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 TRIM25Q14258 630 aaKnown RBP20.84■□□□□ 0.93
LIMD2-207ENST00000579329 HIST3H3Q16695 136 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 PGGHGQ32M88 737 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 SHEQ5VZ18 495 aa20.84■□□□□ 0.93
LIMD2-207ENST00000579329 LCN8Q6JVE9 175 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms