RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZNF208O43345 1280 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 ZNF354AO60765 605 aaPredicted RBP9.1□□□□□ -0.95
SS18-210ENST00000578700 INMTO95050 263 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 TFPIP10646 304 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 APEHP13798 732 aaKnown RBP9.1□□□□□ -0.95
SS18-210ENST00000578700 FOSL1P15407 271 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 C21orf33P30042 268 aaPredicted RBP9.1□□□□□ -0.95
SS18-210ENST00000578700 GSTT1P30711 240 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 SLC15A1P46059 708 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 SLC16A1P53985 500 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 GAS1P54826 345 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 POU4F2Q12837 409 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 MED22Q15528 200 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 TOMM34Q15785 309 aaPredicted RBP9.1□□□□□ -0.95
SS18-210ENST00000578700 TIGD6Q17RP2 521 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 TIMM50Q3ZCQ8 353 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 KLHL12Q53G59 568 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 RNLSQ5VYX0 342 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 PLBD1Q6P4A8 553 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 MEPCEQ7L2J0 689 aaKnown RBP9.1□□□□□ -0.95
SS18-210ENST00000578700 SLC46A3Q7Z3Q1 461 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 SLC22A16Q86VW1 577 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 P2RY8Q86VZ1 359 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 PSD4Q8NDX1 1056 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 OR2M7Q8NG81 312 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 RNF138Q8WVD3 245 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 ZBTB8AQ96BR9 441 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 SLC25A36Q96CQ1 311 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 ANGPTL4Q9BY76 406 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 DLL4Q9NR61 685 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 CRIM1Q9NZV1 1036 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 CHRNA9Q9UGM1 479 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 HIF3AQ9Y2N7 669 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 IER3IP1Q9Y5U9 82 aa9.1□□□□□ -0.95
SS18-210ENST00000578700 COL6A5A8TX70 2615 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 A0A0G2JMM0 328 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 A0A1W2PPB8 328 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 A0A1W2PRS3 328 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 TMEM72A0PK05 275 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 ANKRD33BA6NCL7 494 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 KIR3DP1A8MWS1 328 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 MCIDASD6RGH6 385 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 XKRYO14609 159 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 TRIM3O75382 744 aaPredicted RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 HSMCR30P0CW71 290 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 ADH6P28332 368 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 IDUAP35475 653 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 GP2P55259 537 aaKnown RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 FXYD6P3P58550 94 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 RPS4XP62701 263 aaKnown RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 ITGADQ13349 1161 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 PRAMEF20Q5VT98 475 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 GTF2IRD2BQ6EKJ0 949 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 CLEC9AQ6UXN8 241 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 BCDIN3DQ7Z5W3 292 aaKnown RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 GTF2IRD2Q86UP8 949 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 ADGRG3Q86Y34 549 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 PLCZ1Q86YW0 608 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 LRRC17Q8N6Y2 441 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 SLC37A3Q8NCC5 494 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 PROKR2Q8NFJ6 384 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 OR52E2Q8NGJ4 325 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 OR1J4Q8NGS1 313 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 TAAR8Q969N4 342 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 LGALS12Q96DT0 336 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 KTI12Q96EK9 354 aaPredicted RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 SIGLEC11Q96RL6 698 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 GPX7Q96SL4 187 aaPredicted RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 TTTY12Q9BZ98 90 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 NRIP3Q9NQ35 241 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 MRPS18AQ9NVS2 196 aaKnown RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 DKKL1Q9UK85 242 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 VDAC3Q9Y277 283 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 FAM215AQ9Y5M1 114 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 CORINQ9Y5Q5 1042 aa9.09□□□□□ -0.95
SS18-210ENST00000578700 CHCHD2Q9Y6H1 151 aaPredicted RBP9.09□□□□□ -0.95
SS18-210ENST00000578700 TLN2Q9Y4G6 2542 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 FAM183AA6NL82 134 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 A6NNC1 897 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 LRRN3E7EW58 273 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 RNF13O43567 381 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CBR3O75828 277 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SERPINI2O75830 405 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 SLC2A10O95528 541 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 RENP00797 406 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 LCKP06239 509 aa9.08□□□□□ -0.96
SS18-210ENST00000578700 CD14P08571 375 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms