RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 OR2T12Q8NG77 320 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 BBS10Q8TAM1 723 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TMEM234Q8WY98 164 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CLPTM1LQ96KA5 538 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CDRT15Q96T59 188 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 GPA33Q99795 319 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 RSPO3Q9BXY4 272 aaPredicted RBP6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 MS4A5Q9H3V2 200 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 FN3KRPQ9HA64 309 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 POLE3Q9NRF9 147 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ACER3Q9NUN7 267 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 THUMPD1Q9NXG2 353 aaKnown RBP6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 NDE1Q9NXR1 346 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 GAR1Q9NY12 217 aaKnown RBP6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 DTNAQ9Y4J8 743 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 DSPPQ9NZW4 1301 aa6.16□□□□□ -1.42
CDK5RAP3-209ENST00000578663 A0A0G2JPF8 293 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ELOVL7A1L3X0 281 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TMEM247A6NEH6 219 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 AGAP5A6NIR3 686 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 OR6C65A6NJZ3 312 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CLDN24A6NM45 220 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 HNRNPCL2B2RXH8 293 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 HNRNPCL3B7ZW38 293 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 C5orf58C9J3I9 102 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 EBAG9O00559 213 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TIMM23O14925 209 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 GYG2O15488 501 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 HNRNPCL1O60812 293 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 RP2O75695 350 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 MPZL1O95297 269 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 OPN1SWP03999 348 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 GUSBP08236 651 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ADRA2AP08913 450 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 HNRNPCL4P0DMR1 293 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 NCK1P16333 377 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TCN1P20061 433 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 RPS4Y1P22090 263 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CALCRP30988 508 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 MSX2P35548 267 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 APOBEC1P41238 236 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CRYBA2P53672 197 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SH3BGRP55822 239 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SESN3P58005 492 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 UBE2NP61088 152 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 PLAURQ03405 335 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 MERTKQ12866 999 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SKP2Q13309 424 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SLC17A1Q14916 467 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ZNF141Q15928 474 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SAMD4BQ5PRF9 694 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 PDZK1Q5T2W1 519 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 DCAF12L2Q5VW00 463 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 PRAMEF8Q5VWM4 474 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 PRAMEF7Q5VXH5 474 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 AP1ARQ63HQ0 302 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 REEP3Q6NUK4 255 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ERICH5Q6P6B1 374 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CCDC121Q6ZUS5 278 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 COMTD1Q86VU5 262 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CARM1Q86X55 608 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 VRK2Q86Y07 508 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TMCO5AQ8N6Q1 288 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SIGLECL1Q8N7X8 197 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 IL17RDQ8NFM7 739 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 OR1K1Q8NGR3 316 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 OR52P1PQ8NH57 321 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 WFDC12Q8WWY7 111 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 OIT3Q8WWZ8 545 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 SLC25A28Q96A46 364 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TAMM41Q96BW9 452 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ZNF524Q96C55 264 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 C1orf147Q96MC9 270 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 KCTD14Q9BQ13 255 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 THTPAQ9BU02 230 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CADM1Q9BY67 442 aaKnown RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 C1orf21Q9H246 121 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TPK1Q9H3S4 243 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 NARFLQ9H6Q4 476 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ZNF665Q9H7R5 613 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 BCL2L10Q9HD36 194 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ZNF275Q9NSD4 429 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CALML5Q9NZT1 146 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CHRNA9Q9UGM1 479 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CD300AQ9UGN4 299 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 EGFL7Q9UHF1 273 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 OPN4Q9UHM6 478 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ANGPT4Q9Y264 503 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 TRAPPC4Q9Y296 219 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 ZNF443Q9Y2A4 671 aaPredicted RBP6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 AP3M1Q9Y2T2 418 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CMAHPQ9Y471 501 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.42
CDK5RAP3-209ENST00000578663 PPIAL4EA0A075B759 164 aa6.14□□□□□ -1.43
CDK5RAP3-209ENST00000578663 PPIAL4CA0A0B4J2A2 164 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms