RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 IGHG1P01857 330 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 APEHP13798 732 aaKnown RBP10.74□□□□□ -0.69
IFT20-207ENST00000578547 HIST1H1CP16403 213 aaKnown RBP10.74□□□□□ -0.69
IFT20-207ENST00000578547 GRK5P34947 590 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 OPRM1P35372 400 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 OR3A2P47893 321 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 GIPRP48546 466 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 CSNK1A1P48729 337 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 AQP4P55087 323 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 CDK5Q00535 292 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.74□□□□□ -0.69
IFT20-207ENST00000578547 CD47Q08722 323 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 ACSM5Q6NUN0 579 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 LEG1Q6P5S2 330 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 IZUMO2Q6UXV1 221 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 TFAP2EQ6VUC0 442 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 LUZP2Q86TE4 346 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 LIX1LQ8IVB5 337 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 GPR137CQ8N3F9 429 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 LNX2Q8N448 690 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 OR52E2Q8NGJ4 325 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 OR4K13Q8NH42 304 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 CYGBQ8WWM9 190 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 HDAC2Q92769 488 aaKnown RBP10.74□□□□□ -0.69
IFT20-207ENST00000578547 STARD4Q96DR4 205 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 SLC25A44Q96H78 314 aaPredicted RBP10.74□□□□□ -0.69
IFT20-207ENST00000578547 PLEKHA8Q96JA3 519 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 ALKBH3Q96Q83 286 aaPredicted RBP10.74□□□□□ -0.69
IFT20-207ENST00000578547 SLC38A2Q96QD8 506 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 TEX12Q9BXU0 123 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 SLCO5A1Q9H2Y9 848 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 SLC25A19Q9HC21 320 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 TVP23BQ9NYZ1 205 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 PRSS50Q9UI38 385 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 RELNP78509 3460 aa10.74□□□□□ -0.69
IFT20-207ENST00000578547 DIDO1Q9BTC0 2240 aaKnown RBP10.73□□□□□ -0.69
IFT20-207ENST00000578547 FAM90A27PA6NNH2 459 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 RIIAD1A6NNX1 92 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 DLGAP1O14490 977 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 IMPA2O14732 288 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ARPC3O15145 178 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 IDH3BO43837 385 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ZG16O60844 167 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 UPK3AO75631 287 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ZNF432O94892 652 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 TXNDC12O95881 172 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 IFNGP01579 166 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 PGA4P0DJD7 388 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 PGA3P0DJD8 388 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 CHRNB4P30926 498 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 VHLP40337 213 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 FMODQ06828 376 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 PHYHD1Q5SRE7 291 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 TSPO2Q5TGU0 170 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 SLX4IPQ5VYV7 408 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 PTCHD4Q6ZW05 846 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ADCK1Q86TW2 530 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ZNF610Q8N9Z0 462 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 CYB561A3Q8NBI2 242 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 RELL2Q8NC24 303 aaPredicted RBP10.73□□□□□ -0.69
IFT20-207ENST00000578547 ZNF555Q8NEP9 628 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 OTULINQ96BN8 352 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 RDH12Q96NR8 316 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 NMNAT3Q96T66 252 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 PRRG3Q9BZD7 231 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ULBP2Q9BZM5 246 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 FN3KQ9H479 309 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 RERGLQ9H628 205 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 B3GAT2Q9NPZ5 323 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 SLC7A10Q9NS82 523 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 UPB1Q9UBR1 384 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 ZNF629Q9UEG4 869 aaPredicted RBP10.73□□□□□ -0.69
IFT20-207ENST00000578547 GMPPBQ9Y5P6 360 aa10.73□□□□□ -0.69
IFT20-207ENST00000578547 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
IFT20-207ENST00000578547 PRSS37A4D1T9 235 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 SURF4O15260 269 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 AGFG2O95081 481 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 IL18BPO95998 194 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 RENP00797 406 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CGAP01215 116 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 HMGN1P05114 100 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 RNF224P0DH78 156 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CD8BP10966 210 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CDKN2AP42771 156 aaKnown RBP10.72□□□□□ -0.69
IFT20-207ENST00000578547 ROR2Q01974 943 aaKnown RBP10.72□□□□□ -0.69
IFT20-207ENST00000578547 DBPQ10586 325 aaPredicted RBP10.72□□□□□ -0.69
IFT20-207ENST00000578547 FAPQ12884 760 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 ITGADQ13349 1161 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CRMP1Q14194 572 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CDSNQ15517 529 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 SNAPC1Q16533 368 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 C9orf135Q5VTT2 229 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 C12orf73Q69YU5 71 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 C20orf196Q8IYI0 205 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 POMGNT2Q8NAT1 580 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 SLC37A3Q8NCC5 494 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 CA5BP1Q8WTZ4 195 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 ASB5Q8WWX0 329 aa10.72□□□□□ -0.69
IFT20-207ENST00000578547 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms