RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 H3F3CQ6NXT2 135 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 ARSKQ6UWY0 536 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 DCDC5Q6ZRR9 648 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 SLC35D2Q76EJ3 337 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 PPP1R32Q7Z5V6 425 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 GLRX5Q86SX6 157 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 PM20D2Q8IYS1 436 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 OR6V1Q8N148 313 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 CENPSQ8N2Z9 138 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 GTPBP8Q8N3Z3 284 aaPredicted RBP10.02□□□□□ -0.81
SKA2-204ENST00000578519 SYT14Q8NB59 555 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 OR10H5Q8NGA6 315 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 THEM6Q8WUY1 208 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 KCNE4Q8WWG9 221 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 DIRAS2Q96HU8 199 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 OXGR1Q96P68 337 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 PIGQQ9BRB3 760 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 OR11A1Q9GZK7 315 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 SYT4Q9H2B2 425 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 ABCB10Q9NRK6 738 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 FAIMQ9NVQ4 179 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 KLHL9Q9P2J3 617 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 ST6GALNAC2Q9UJ37 374 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 RASD1Q9Y272 281 aa10.02□□□□□ -0.81
SKA2-204ENST00000578519 REV3LO60673 3130 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 LOC102725191A0A1B0GVB3 256 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ZNF726A6NNF4 738 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 C4orf47A7E2U8 309 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 MS4A18H0YCH9 400 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 LINC01387J3KSC0 135 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 SULT2B1O00204 365 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 DNPH1O43598 174 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ZNF254O75437 659 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 PMS2P2O95744 297 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 RAF1P04049 648 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ALOX5APP20292 161 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 RAB3BP20337 219 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 DLSTP36957 453 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 GUCA1AP43080 201 aaPredicted RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 GPR85P60893 370 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ALKBH1Q13686 389 aaKnown RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 TRIP6Q15654 476 aaKnown RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 ZNF239Q16600 458 aaKnown RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 MS4A18Q3C1V0 323 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 HSD17B12Q53GQ0 312 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ZMAT1Q5H9K5 638 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 TEX30Q5JUR7 227 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 THEM4Q5T1C6 240 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 PDSS1Q5T2R2 415 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 TIGD3Q6B0B8 471 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 FAM131AQ6UXB0 335 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 TMEM91Q6ZNR0 172 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 OR8H2Q8N162 312 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 GHDCQ8N2G8 530 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ZNF511Q8NB15 262 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 OR5AK2Q8NH90 309 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 OTOSQ8NHW6 89 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ASB10Q8WXI3 467 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 NSMAFQ92636 917 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 TRMT61AQ96FX7 289 aaKnown RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 FER1L6-AS2Q96M78 137 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 OR5B2Q96R09 309 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 TIMP4Q99727 224 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 BARHL1Q9BZE3 327 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 SPRY4Q9C004 299 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 P4HTMQ9NXG6 502 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 ABRACLQ9P1F3 81 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 PLEKHB1Q9UF11 243 aaPredicted RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 KCNG2Q9UJ96 466 aa10.01□□□□□ -0.81
SKA2-204ENST00000578519 MRPS18CQ9Y3D5 142 aaKnown RBP10.01□□□□□ -0.81
SKA2-204ENST00000578519 TEX51A0A1B0GUA7 166 aa10□□□□□ -0.81
SKA2-204ENST00000578519 TMEM212A6NML5 194 aa10□□□□□ -0.81
SKA2-204ENST00000578519 FAM171A2A8MVW0 826 aa10□□□□□ -0.81
SKA2-204ENST00000578519 FAM25AB3EWG3 89 aa10□□□□□ -0.81
SKA2-204ENST00000578519 FAM25CB3EWG5 89 aa10□□□□□ -0.81
SKA2-204ENST00000578519 FAM25GB3EWG6 89 aa10□□□□□ -0.81
SKA2-204ENST00000578519 H3BML4 177 aa10□□□□□ -0.81
SKA2-204ENST00000578519 STMND1H3BQB6 276 aa10□□□□□ -0.81
SKA2-204ENST00000578519 ZNF593O00488 134 aaPredicted RBP10□□□□□ -0.81
SKA2-204ENST00000578519 TBX1O43435 398 aa10□□□□□ -0.81
SKA2-204ENST00000578519 GDF9O60383 454 aa10□□□□□ -0.81
SKA2-204ENST00000578519 RAD1O60671 282 aa10□□□□□ -0.81
SKA2-204ENST00000578519 AQP8O94778 261 aa10□□□□□ -0.81
SKA2-204ENST00000578519 PTTG1O95997 202 aa10□□□□□ -0.81
SKA2-204ENST00000578519 PLGP00747 810 aaPredicted RBP10□□□□□ -0.81
SKA2-204ENST00000578519 IGHG1P01857 330 aa10□□□□□ -0.81
SKA2-204ENST00000578519 HRGP04196 525 aa10□□□□□ -0.81
SKA2-204ENST00000578519 IMPDH2P12268 514 aa10□□□□□ -0.81
SKA2-204ENST00000578519 LIFP15018 202 aa10□□□□□ -0.81
SKA2-204ENST00000578519 ZNF43P17038 809 aa10□□□□□ -0.81
SKA2-204ENST00000578519 SRD5A2P31213 254 aa10□□□□□ -0.81
SKA2-204ENST00000578519 CYB561P49447 251 aa10□□□□□ -0.81
SKA2-204ENST00000578519 CCR9P51686 369 aa10□□□□□ -0.81
SKA2-204ENST00000578519 RIDAP52758 137 aaKnown RBP10□□□□□ -0.81
SKA2-204ENST00000578519 CLRN1P58418 232 aa10□□□□□ -0.81
SKA2-204ENST00000578519 SCN1BQ07699 218 aa10□□□□□ -0.81
SKA2-204ENST00000578519 MYBPHQ13203 477 aa10□□□□□ -0.81
SKA2-204ENST00000578519 TMEM176BQ3YBM2 270 aaPredicted RBP10□□□□□ -0.81
SKA2-204ENST00000578519 HES3Q5TGS1 186 aa10□□□□□ -0.81
SKA2-204ENST00000578519 ABHD17BQ5VST6 288 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms