RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SLC22A16Q86VW1 577 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 P2RY8Q86VZ1 359 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 PSD4Q8NDX1 1056 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 OR2M7Q8NG81 312 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 RNF138Q8WVD3 245 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 ZBTB8AQ96BR9 441 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 SLC25A36Q96CQ1 311 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 ANGPTL4Q9BY76 406 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 DLL4Q9NR61 685 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 PLSCR2Q9NRY7 297 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 CRIM1Q9NZV1 1036 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 CHRNA9Q9UGM1 479 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 HIF3AQ9Y2N7 669 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 IER3IP1Q9Y5U9 82 aa9.1□□□□□ -0.95
SS18-207ENST00000577636 A0A0G2JMM0 328 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 A0A1W2PPB8 328 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 A0A1W2PRS3 328 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 TMEM72A0PK05 275 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 ANKRD33BA6NCL7 494 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 KIR3DP1A8MWS1 328 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 MCIDASD6RGH6 385 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 XKRYO14609 159 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 TRIM3O75382 744 aaPredicted RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 HSMCR30P0CW71 290 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 ADH6P28332 368 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 IDUAP35475 653 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 GP2P55259 537 aaKnown RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 FXYD6P3P58550 94 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 RPS4XP62701 263 aaKnown RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 ITGADQ13349 1161 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 PRAMEF20Q5VT98 475 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 GTF2IRD2BQ6EKJ0 949 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 CLEC9AQ6UXN8 241 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 BCDIN3DQ7Z5W3 292 aaKnown RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 GTF2IRD2Q86UP8 949 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 ADGRG3Q86Y34 549 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 PLCZ1Q86YW0 608 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 LRRC17Q8N6Y2 441 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 SLC37A3Q8NCC5 494 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 PROKR2Q8NFJ6 384 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 OR52E2Q8NGJ4 325 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 OR1J4Q8NGS1 313 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 PAQR8Q8TEZ7 354 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 TAAR8Q969N4 342 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 LGALS12Q96DT0 336 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 KTI12Q96EK9 354 aaPredicted RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 MRPL48Q96GC5 212 aaKnown RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 SIGLEC11Q96RL6 698 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 GPX7Q96SL4 187 aaPredicted RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 TTTY12Q9BZ98 90 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 FGF20Q9NP95 211 aaPredicted RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 NRIP3Q9NQ35 241 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 MRPS18AQ9NVS2 196 aaKnown RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 DKKL1Q9UK85 242 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 VDAC3Q9Y277 283 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 FAM215AQ9Y5M1 114 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 CORINQ9Y5Q5 1042 aa9.09□□□□□ -0.95
SS18-207ENST00000577636 CHCHD2Q9Y6H1 151 aaPredicted RBP9.09□□□□□ -0.95
SS18-207ENST00000577636 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 FAM183AA6NL82 134 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 A6NNC1 897 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 LRRN3E7EW58 273 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 RNF13O43567 381 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CBR3O75828 277 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SERPINI2O75830 405 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SLC2A10O95528 541 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 RENP00797 406 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 LCKP06239 509 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CD14P08571 375 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CELA3AP09093 270 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ASAH2BP0C7U1 165 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ADORA3P0DMS8 318 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CD36P16671 472 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CNR1P21554 472 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 AQP2P41181 271 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 MAGEA5P43359 124 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CAPZA2P47755 286 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CLK1P49759 484 aaKnown RBP9.08□□□□□ -0.96
SS18-207ENST00000577636 DSCR4P56555 118 aaPredicted RBP9.08□□□□□ -0.96
SS18-207ENST00000577636 CTXN1P60606 82 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ERVK-25P63136 954 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ACTC1P68032 377 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ACTA1P68133 377 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 EGR4Q05215 589 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 FOXF1Q12946 379 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 CRMP1Q14194 572 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 IRF3Q14653 427 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SLC10A1Q14973 349 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 PON3Q15166 354 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SPHARQ15513 63 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SGCBQ16585 318 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SLC25A35Q3KQZ1 300 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 SLC25A53Q5H9E4 307 aa9.08□□□□□ -0.96
SS18-207ENST00000577636 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms