RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ETFAP13804 333 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 CSNK1A1P48729 337 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 ATP4BP51164 291 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 AQP5P55064 265 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 ABCE1P61221 599 aaKnown RBP11.38□□□□□ -0.59
COPS3-214ENST00000577246 PUDPQ08623 228 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 MAPK11Q15759 364 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 ALG10BQ5I7T1 473 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 USP51Q70EK9 711 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 SIGLECL1Q8N7X8 197 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 LSMEM1Q8N8F7 131 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 SLC30A7Q8NEW0 376 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 OR1J2Q8NGS2 313 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.38□□□□□ -0.59
COPS3-214ENST00000577246 DVL3Q92997 716 aaPredicted RBP11.38□□□□□ -0.59
COPS3-214ENST00000577246 TMEM19Q96HH6 336 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 BCL2L14Q9BZR8 327 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 SLITRK2Q9H156 845 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 LRMDAQ9H2I8 198 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 ZNF224Q9NZL3 707 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 KLHL14Q9P2G3 628 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 OPN4Q9UHM6 478 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 NUP50Q9UKX7 468 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 GPR45Q9Y5Y3 372 aa11.38□□□□□ -0.59
COPS3-214ENST00000577246 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 MS4A18H0YCH9 400 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 ANP32DO95626 131 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 SNAP29O95721 258 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 IL6P05231 212 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 LCKP06239 509 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 FAM157BP0CG42 384 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 NME5P56597 212 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 NCALDP61601 193 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 UFM1P61960 85 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 IFFO1Q0D2I5 559 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 BAMBIQ13145 260 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 PMS2P3Q13401 168 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 OCLNQ16625 522 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 TBC1D28Q2M2D7 210 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 MS4A18Q3C1V0 323 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 RPS26P11Q5JNZ5 115 aaPredicted RBP11.37□□□□□ -0.59
COPS3-214ENST00000577246 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 TMEM53Q6P2H8 277 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 ULK3Q6PHR2 472 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 PXKQ7Z7A4 578 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 MIER2Q8N344 545 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 TRIM44Q96DX7 344 aaPredicted RBP11.37□□□□□ -0.59
COPS3-214ENST00000577246 SLC41A3Q96GZ6 507 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 TEX37Q96LM6 180 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 NUF2Q9BZD4 464 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 RMND5AQ9H871 391 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 MEAF6Q9HAF1 191 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 AIG1Q9NVV5 245 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 LGALS13Q9UHV8 139 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 CHST2Q9Y4C5 530 aa11.37□□□□□ -0.59
COPS3-214ENST00000577246 ISPDA4D126 451 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 CLDN34H7C241 214 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 ITM2AO43736 263 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 CLPTM1O96005 669 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
COPS3-214ENST00000577246 ZCCHC18P0CG32 403 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 HLA-DOBP13765 273 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 CBLP22681 906 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 MVDP53602 400 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 LCN2P80188 198 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 HOXC5Q00444 222 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 PLP2Q04941 152 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 UNQ6126/PRO20091Q6UXV3 157 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 ZNF584Q8IVC4 421 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 SLC22A24Q8N4F4 322 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 BBS10Q8TAM1 723 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 LRRC58Q96CX6 371 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 SLC47A1Q96FL8 570 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 EGLN1Q9GZT9 426 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 RNF121Q9H920 327 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 TPT1P8Q9HAU6 139 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 MRPL39Q9NYK5 338 aaKnown RBP11.36□□□□□ -0.59
COPS3-214ENST00000577246 PLEK2Q9NYT0 353 aa11.36□□□□□ -0.59
COPS3-214ENST00000577246 IGKV1D-42A0A075B6H8 117 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 IQCMA0A1B0GVH7 501 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 A0A1B0GWA3 101 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 PLSCR5A0PG75 271 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 C5orf58C9J3I9 102 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 BIRC5O15392 142 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 HPRP00739 348 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 AHCYP23526 432 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 PRKAR1BP31321 381 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 ETV4P43268 484 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 ZNF81P51508 661 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 UCP2P55851 309 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 TSTQ16762 297 aaKnown RBP11.35□□□□□ -0.59
COPS3-214ENST00000577246 TUSC1Q2TAM9 212 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 SKA3Q8IX90 412 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 C10orf53Q8N6V4 93 aa11.35□□□□□ -0.59
COPS3-214ENST00000577246 ICA1LQ8NDH6 482 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms