RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 HFEQ30201 348 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 PCGF3Q3KNV8 242 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 FAM69AQ5T7M9 428 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 RNF220Q5VTB9 566 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 TRIML2Q8N7C3 387 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF781Q8N8C0 355 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ICA1LQ8NDH6 482 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 DEFB108BQ8NET1 73 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC38A5Q8WUX1 472 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SNX33Q8WV41 574 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 LRR1Q96L50 414 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 GAL3ST1Q99999 423 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SPATA9Q9BWV2 254 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 RSPO3Q9BXY4 272 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ULBP2Q9BZM5 246 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 C20orf27Q9GZN8 174 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SLITRK2Q9H156 845 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 DENND2DQ9H6A0 471 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC6A13Q9NSD5 602 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 NKIRAS2Q9NYR9 191 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 PDP1Q9P0J1 537 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF232Q9UNY5 417 aa8.58□□□□□ -1.04
NPLOC4-220ENST00000576940 A0A087WUJ7 227 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 ISPDA4D126 451 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 WDR91A4D1P6 747 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 LRRN3E7EW58 273 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 TRAPPC2LH3BP13 241 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SPRY3O43610 288 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 FZD7O75084 574 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SERPINI2O75830 405 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 OR8G3PP0DMU2 310 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 PCGF2P35227 344 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 CRATP43155 626 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 KLF3P57682 345 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 TXNL4AP83876 142 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 RBBP4Q09028 425 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 MMEL1Q495T6 779 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SPRNQ5BIV9 151 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 WDR88Q6ZMY6 472 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 NET1Q7Z628 596 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 GLB1L3Q8NCI6 653 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC30A7Q8NEW0 376 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 BHLHE22Q8NFJ8 381 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF519Q8TB69 540 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 C11orf40Q8WZ69 217 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC38A4Q969I6 547 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 TIMD4Q96H15 378 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 TMEM19Q96HH6 336 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 OR52E6Q96RD3 313 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 GPA33Q99795 319 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SH3GL3Q99963 347 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SAP30LQ9HAJ7 183 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 B3GAT2Q9NPZ5 323 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 MKS1Q9NXB0 559 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 SLCO1C1Q9NYB5 712 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 PLEK2Q9NYT0 353 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 P2RX2Q9UBL9 471 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 GPR160Q9UJ42 338 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 AUP1Q9Y679 476 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 WNK1Q9H4A3 2382 aa8.57□□□□□ -1.04
NPLOC4-220ENST00000576940 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 IGHV3OR16-10A0A075B7F0 116 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 A0A0G2JPF8 293 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 A0A1B0GWA3 101 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC22A23A1A5C7 686 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 HNRNPCL2B2RXH8 293 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 HNRNPCL3B7ZW38 293 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 HNRNPCL1O60812 293 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 KRT75O95678 551 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 GPANK1O95872 356 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 HNRNPCL4P0DMR1 293 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 LBPP18428 481 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 AHCYP23526 432 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 HTR2AP28223 471 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 ATP4BP51164 291 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 CLNS1AP54105 237 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 CRISP3P54108 245 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 UCP2P55851 309 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 ZNF154Q13106 437 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 DPY19L1Q2PZI1 675 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 ARMCX4Q5H9R4 360 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 PIWIL3Q7Z3Z3 882 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 NUDCD3Q8IVD9 361 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC22A24Q8N4F4 322 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 KIR3DL3Q8N743 410 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 SYT14Q8NB59 555 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 ST7LQ8TDW4 575 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 POP5Q969H6 163 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC25A28Q96A46 364 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 TMIGD2Q96BF3 282 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 SLC41A3Q96GZ6 507 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 ZIM3Q96PE6 472 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 DCLRE1CQ96SD1 692 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 PKP2Q99959 881 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 NUF2Q9BZD4 464 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 RNF121Q9H920 327 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 PPCSQ9HAB8 311 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 CDH20Q9HBT6 801 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 MED4Q9NPJ6 270 aa8.56□□□□□ -1.04
NPLOC4-220ENST00000576940 DCAF16Q9NXF7 216 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms