RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 C10orf105Q8TEF2 133 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SLC38A5Q8WUX1 472 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 IPCEF1Q8WWN9 437 aaPredicted RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 OIT3Q8WWZ8 545 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 VPS33AQ96AX1 596 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SLC25A36Q96CQ1 311 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 TMEM19Q96HH6 336 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 WWC2-AS2Q96NR7 200 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 OR52B2Q96RD2 323 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 TNFRSF13CQ96RJ3 184 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 ZBTB18Q99592 522 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 RSPO3Q9BXY4 272 aaPredicted RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 PARPBPQ9NWS1 579 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SEC14L4Q9UDX3 406 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 ZNF443Q9Y2A4 671 aaPredicted RBP5.41□□□□□ -1.54
NUP88-212ENST00000576708 AMDHD2Q9Y303 409 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 SNX5Q9Y5X3 404 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 DSPPQ9NZW4 1301 aa5.41□□□□□ -1.54
NUP88-212ENST00000576708 TMEM120BA0PK00 339 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 A8MVM7 634 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 H7C417 338 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 HDAC3O15379 428 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 PHF1O43189 567 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 SLC22A3O75751 556 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 KRT33AO76009 404 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 ANP32DO95626 131 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 KRT75O95678 551 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 GPIP06744 558 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 IGHV4-31P0DP07 118 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 PF4V1P10720 104 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 NCF2P19878 526 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 CBLP22681 906 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 FKBP2P26885 142 aaKnown RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 APOBEC3AP31941 199 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 ANXA11P50995 505 aaKnown RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 EFNA4P52798 201 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 DSTNP60981 165 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 EGR4Q05215 589 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 LOXL1Q08397 574 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 PIN1Q13526 163 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 GNA13Q14344 377 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 GGTLC2Q14390 218 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 CARTPTQ16568 116 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 GSTA3Q16772 222 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 TBRG1Q3YBR2 411 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 CHRFAM7AQ494W8 412 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 LIN52Q52LA3 116 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 PDCD4Q53EL6 469 aaKnown RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 C1orf140Q5VVS0 124 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 TMEM225Q6GV28 225 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 WBP2NLQ6ICG8 309 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 ZNF544Q6NX49 715 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 NIPAL3Q6P499 406 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 PODNL1Q6PEZ8 512 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 SLC2A7Q6PXP3 512 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 CREB3L2Q70SY1 520 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 SSX8Q7RTT4 187 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 MYPOPQ86VE0 399 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 COMTD1Q86VU5 262 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 LRRC34Q8IZ02 419 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 C10orf111Q8N326 155 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 C17orf78Q8N4C9 275 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 OR1K1Q8NGR3 316 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 BCL2L2Q92843 193 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 MAL2Q969L2 176 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 TMEM45BQ96B21 275 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 C3orf49Q96BT1 292 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 C8orf49Q96NF6 230 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 ALKBH3Q96Q83 286 aaPredicted RBP5.4□□□□□ -1.54
NUP88-212ENST00000576708 PTDSS2Q9BVG9 487 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 TAPBPLQ9BX59 468 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 FKRPQ9H9S5 495 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 TPT1P8Q9HAU6 139 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 P2RX2Q9UBL9 471 aa5.4□□□□□ -1.54
NUP88-212ENST00000576708 ALPK2Q86TB3 2170 aa5.4□□□□□ -1.55
NUP88-212ENST00000576708 FBN3Q75N90 2809 aa5.4□□□□□ -1.55
NUP88-212ENST00000576708 SONP18583 2426 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 IGHV4-61A0A0C4DH41 118 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 A0A0G2JPF8 293 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 TRPC5OSA6NMA1 111 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 FAM25EA8MYX2 175 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 VWC2LB2RUY7 222 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 HNRNPCL2B2RXH8 293 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 HNRNPCL3B7ZW38 293 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 FTCDNL1E5RQL4 147 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 HOXA3O43365 443 aaPredicted RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 HNRNPCL1O60812 293 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 NPIPB7O75200 414 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 SEC14L2O76054 403 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 IL6P05231 212 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 CECR9P0C854 216 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 HNRNPCL4P0DMR1 293 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 PNMTP11086 282 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 IDO1P14902 403 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 UQCRBP14927 111 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 SLC25A16P16260 332 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 USF1P22415 310 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms