RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PMS2P3Q13401 168 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 HFEQ30201 348 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 MS4A18Q3C1V0 323 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 PDLIM3Q53GG5 364 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 FAM91A1Q658Y4 838 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 ULK3Q6PHR2 472 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 RETREG3Q86VR2 466 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF584Q8IVC4 421 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 MIER2Q8N344 545 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZDHHC22Q8N966 263 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC30A7Q8NEW0 376 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR6S1Q8NH40 331 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 BBS10Q8TAM1 723 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 SYNPRQ8TBG9 265 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC47A1Q96FL8 570 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC41A3Q96GZ6 507 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 ITCHQ96J02 903 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 C1orf198Q9H425 327 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 C7orf69Q9H7B7 122 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 BCL2L10Q9HD36 194 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 A4GALTQ9NPC4 353 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 ESM1Q9NQ30 184 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 DECR2Q9NUI1 292 aa9.94□□□□□ -0.82
CTDNEP1-212ENST00000576613 IGLV3-9A0A075B6K5 115 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 SDHDO14521 159 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 TM9SF1O15321 606 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 DEAF1O75398 565 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC22A3O75751 556 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 CLPTM1O96005 669 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 FAM157BP0CG42 384 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR8G3PP0DMU2 310 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 HKR1P10072 659 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 IDO1P14902 403 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF250P15622 560 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 AHCYP23526 432 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 HTR2AP28223 471 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 PRKAR1BP31321 381 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 FADDQ13158 208 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 MOGQ16653 247 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 C6orf10Q5SRN2 563 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 MSANTD1Q6ZTZ1 278 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 PXKQ7Z7A4 578 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 SKA3Q8IX90 412 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 SLC22A24Q8N4F4 322 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 C10orf53Q8N6V4 93 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZNF519Q8TB69 540 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 C11orf40Q8WZ69 217 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 RAB1CQ92928 201 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 VPS33AQ96AX1 596 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 TXNDC15Q96J42 360 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 GAL3ST1Q99999 423 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 RAD21L1Q9H4I0 556 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 ZMAT3Q9HA38 289 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 SAP30LQ9HAJ7 183 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 CDH20Q9HBT6 801 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 PNPOQ9NVS9 261 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 MRPL39Q9NYK5 338 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 TESQ9UGI8 421 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 WIPI2Q9Y4P8 454 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
CTDNEP1-212ENST00000576613 TRPC5OSA6NMA1 111 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 SERPINI2O75830 405 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 FARS2O95363 451 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 SNAP29O95721 258 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 PTHP01270 115 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 LCKP06239 509 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 PATE4P0C8F1 98 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 ETS2P15036 469 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 BGNP21810 368 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 DRD4P21917 467 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 EPHA3P29320 983 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 RGNQ15493 299 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 TBC1D28Q2M2D7 210 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM53Q6P2H8 277 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 USP51Q70EK9 711 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 DPPA2Q7Z7J5 298 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 KRT73Q86Y46 540 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR1J2Q8NGS2 313 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 C22orf15Q8WYQ4 148 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 MAL2Q969L2 176 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 SPATA5L1Q9BVQ7 753 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 BCL2L14Q9BZR8 327 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 LRMDAQ9H2I8 198 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR51B6Q9H340 312 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 WDR55Q9H6Y2 383 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 TMEM27Q9HBJ8 222 aa9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 SSU72Q9NP77 194 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-212ENST00000576613 PLPP3O14495 311 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 HDAC3O15379 428 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 OR6A2O95222 327 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 MT-ATP6P00846 226 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 FSHBP01225 129 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 BGLAPP02818 100 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 NUDT7P0C024 238 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 ADORA3P0DMS8 318 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 BMP2P12643 396 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 PRTN3P24158 256 aa9.91□□□□□ -0.82
CTDNEP1-212ENST00000576613 BIDP55957 195 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms