RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.13□□□□□ -0.31
SMG6-215ENST00000574501 TBC1D3KA0A087X1G2 549 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TBC1D3BA6NDS4 549 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TBC1D3FA6NER0 549 aaPredicted RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 C5orf52A6NGY3 159 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 FGF16O43320 207 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TXNL1O43396 289 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 RNGTTO60942 597 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 ALOX12BO75342 701 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 WNT11O96014 354 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 S100A8P05109 93 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 C6P13671 934 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 FOSL1P15407 271 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 SPI1P17947 270 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 PTAFRP25105 342 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 AKR1C3P42330 323 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 POU3F4P49335 361 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 SNRPNP63162 240 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 BTN3A2P78410 334 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 NTHL1P78549 312 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 EIF2S3LQ2VIR3 472 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 GFOD2Q3B7J2 385 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TRMT12Q53H54 448 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 ATPAF1Q5TC12 328 aaPredicted RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 TBC1D3GQ6DHY5 549 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 USP53Q70EK8 1073 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 RASD2Q96D21 266 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 SEC11CQ9BY50 192 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 SELENOIQ9C0D9 397 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ADAP2Q9NPF8 381 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 FLRT3Q9NZU0 649 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 UPB1Q9UBR1 384 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 A0A1W2PPE3 182 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 MANSC4A6NHS7 340 aaPredicted RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 EFCAB7A8K855 629 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 LATO43561 262 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 RAD1O60671 282 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 THBS1P07996 1170 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 PGAM2P15259 253 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 AQP2P41181 271 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 HTRA3P83110 453 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ID2Q02363 134 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 PLAURQ03405 335 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ZIC1Q15915 447 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 PRAMEF17Q5VTA0 474 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 RHOUQ7L0Q8 258 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 MISPQ8IVT2 679 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ZNF619Q8N2I2 560 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 OR2L5Q8NG80 312 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 OR2A1Q8NGT9 310 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 INTS12Q96CB8 462 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ZMAT3Q9HA38 289 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 CAPN10Q9HC96 672 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 ACKR4Q9NPB9 350 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 APOBEC3BQ9UH17 382 aaKnown RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 RPH3AQ9Y2J0 694 aaPredicted RBP13.12□□□□□ -0.31
SMG6-215ENST00000574501 OBSL1O75147 1896 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 CACNA1CQ13936 2221 aa13.12□□□□□ -0.31
SMG6-215ENST00000574501 EFEMP2O95967 443 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 HEXAP06865 529 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 DBIP07108 87 aaKnown RBP13.11□□□□□ -0.31
SMG6-215ENST00000574501 ZNF44P15621 663 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
SMG6-215ENST00000574501 AVPR2P30518 371 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 PRKXP51817 358 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 RAB33AQ14088 237 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 GAS6Q14393 721 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 ARHGAP40Q5TG30 622 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 SKA3Q8IX90 412 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 RPS4Y2Q8TD47 263 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 PCOLCE2Q9UKZ9 415 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 KLHDC2Q9Y2U9 406 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 A0A0B4J2A0 478 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 CXorf51AA0A1B0GTR3 108 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 A0A1B0GWA3 101 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 EEF1E1-BLOC1S5C9J1V9 151 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 SNRNP200O75643 2136 aaKnown RBP13.11□□□□□ -0.31
SMG6-215ENST00000574501 CD79AP11912 226 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 ABCD3P28288 659 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 SDHAP31040 664 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 FABP9Q0Z7S8 132 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 IRF4Q15306 451 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 NKAPLQ5M9Q1 402 aa13.11□□□□□ -0.31
SMG6-215ENST00000574501 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
SMG6-215ENST00000574501 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms