RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SMARCD3Q6STE5 483 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 KLHL17Q6TDP4 642 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 CCDC36Q8IYA8 594 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 PAPD5Q8NDF8 572 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 NOXO1Q8NFA2 376 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR1K1Q8NGR3 316 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 FANK1Q8TC84 345 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 TMEM54Q969K7 222 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 BOD1Q96IK1 185 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 ESRP2Q9H6T0 727 aaKnown RBP11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 RASSF1Q9NS23 344 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 DNAJB9Q9UBS3 223 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 EDARQ9UNE0 448 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 U3KQV3 271 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 UNC79Q9P2D8 2635 aa11.22□□□□□ -0.61
TRAPPC1-206ENST00000573989 ARRDC5A6NEK1 342 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 KLF4O43474 513 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 PTP4A3O75365 173 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 THBDP07204 575 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 FCGR1AP12314 374 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 GSTM3P21266 225 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 SLC6A6P31641 620 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ACVR1BP36896 505 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 GSSP48637 474 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ERFP50548 548 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF84P51523 738 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPS6KA3P51812 740 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 GABPB1Q06547 395 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 LGALS3BPQ08380 585 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 CD47Q08722 323 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ARMC4Q5T2S8 1044 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 GPR139Q6DWJ6 353 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 PGBD2Q6P3X8 592 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 DPY19L2P2Q6ZN68 376 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 LRRC75AQ8NAA5 344 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR52L1Q8NGH7 329 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR4C15Q8NGM1 316 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR52N5Q8NH56 324 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 GIPC3Q8TF64 312 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 RBP7Q96R05 134 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ALG12Q9BV10 488 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 KATNB1Q9BVA0 655 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 CLEC4MQ9H2X3 399 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 SLC17A5Q9NRA2 495 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF346Q9UL40 294 aaKnown RBP11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 AP4S1Q9Y587 144 aa11.21□□□□□ -0.61
TRAPPC1-206ENST00000573989 ABCA4P78363 2273 aa11.21□□□□□ -0.62
TRAPPC1-206ENST00000573989 HEATR1Q9H583 2144 aaKnown RBP11.21□□□□□ -0.62
TRAPPC1-206ENST00000573989 CELSR2Q9HCU4 2923 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 FAM221AA4D161 298 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 AHCYL1O43865 530 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 MGRN1O60291 552 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 TRMUO75648 421 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 FARS2O95363 451 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 QDPRP09417 244 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 FASP25445 335 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 NOS3P29474 1203 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 GUCA1AP43080 201 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 ERVK-25P63136 954 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARF1P84077 181 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 COX10Q12887 443 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 PPP1R8Q12972 351 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 FHL1Q13642 323 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 RFX4Q33E94 735 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 TBRG1Q3YBR2 411 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 THEM4Q5T1C6 240 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 LINGO2Q7L985 606 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 IGFN1Q86VF2 1251 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARIH2OSQ8N7S6 290 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 SYT14Q8NB59 555 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 AQP11Q8NBQ7 271 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 OR10G2Q8NGC3 310 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 OR9Q2Q8NGE9 314 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 NANOS1Q8WY41 292 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 PIK3IP1Q96FE7 263 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 FOXB1Q99853 325 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 BDH2Q9BUT1 245 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 MRPL13Q9BYD1 178 aaKnown RBP11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 OR52D1Q9H346 318 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 ZNF556Q9HAH1 456 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 SMURF2Q9HAU4 748 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARMC1Q9NVT9 282 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 SLC25A15Q9Y619 301 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 PRR14LQ5THK1 2151 aa11.2□□□□□ -0.62
TRAPPC1-206ENST00000573989 ARPC4-TTLL3A0A0A6YYG9 625 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 IMPA2O14732 288 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 DHHO43323 396 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 IDH3BO43837 385 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 TIPRLO75663 272 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 GASTP01350 101 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 HRGP04196 525 aa11.19□□□□□ -0.62
TRAPPC1-206ENST00000573989 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms