RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SLC16A6O15403 523 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 CLPXO76031 633 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 SP1P08047 785 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 QDPRP09417 244 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 FBXO45P0C2W1 286 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 CD8BP10966 210 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 MAKP20794 623 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 GCH1P30793 250 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 SDHAP31040 664 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 MAGEA5P43359 124 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 BCAP31P51572 246 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 SLC36A2Q495M3 483 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 ZBTB8BQ8NAP8 495 aaPredicted RBP9.15□□□□□ -0.95
SMG6-213ENST00000573166 OR13C3Q8NGS6 347 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 C4orf36Q96KX1 117 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 EXOSC3Q9NQT5 275 aaKnown RBP9.15□□□□□ -0.95
SMG6-213ENST00000573166 DIABLOQ9NR28 239 aa9.15□□□□□ -0.95
SMG6-213ENST00000573166 CNOT2Q9NZN8 540 aaKnown RBP9.15□□□□□ -0.95
SMG6-213ENST00000573166 HELZP42694 1942 aaKnown RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 KDM4BO94953 1096 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 OR8G3PP0DMU2 310 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 TUBA3CQ13748 450 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 TMEM205Q6UW68 189 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 CISD2Q8N5K1 135 aaKnown RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 OIT3Q8WWZ8 545 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 INTS12Q96CB8 462 aaKnown RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZNF582Q96NG8 517 aaPredicted RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZNF285Q96NJ3 590 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZFP3Q96NJ6 502 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 CHMP1AQ9HD42 196 aaPredicted RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 FAIMQ9NVQ4 179 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 PRR19A6NJB7 356 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 IGKV1D-16P01601 117 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 MAGEA2P43356 314 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZFP36L2P47974 494 aaKnown RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 ALDH3B2P48448 385 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 SPCS2Q15005 226 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZNF74Q16587 644 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 LCN10Q6JVE6 187 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 ENTHD1Q8IYW4 607 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 RHOXF1Q8NHV9 184 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 FAR1Q8WVX9 515 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZCCHC14Q8WYQ9 949 aaKnown RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 TAAR8Q969N4 342 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 CTHRC1Q96CG8 243 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 POTEKPQ9BYX7 375 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 SLC26A1Q9H2B4 701 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 MCUBQ9NWR8 336 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 MALT1Q9UDY8 824 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 CENPVL1A0A0U1RR11 272 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 hCG_1807616A0A1W2PRN6 198 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZNF814B7Z6K7 855 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 SEC14L2O76054 403 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 IGLV3-21P80748 117 aaPredicted RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 MFAP5Q13361 173 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 GLT8D1Q68CQ7 371 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 C22orf42Q6IC83 251 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ZNF704Q6ZNC4 412 aaPredicted RBP9.14□□□□□ -0.95
SMG6-213ENST00000573166 BTLAQ7Z6A9 289 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 GCNT2Q8N0V5 402 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 OR8S1Q8NH09 359 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 TBC1D15Q8TC07 691 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 GGHQ92820 318 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 SLC35B4Q969S0 331 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 TSSK2Q96PF2 358 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 HCAR1Q9BXC0 346 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 TXNIPQ9H3M7 391 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 CMC2Q9NRP2 79 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 C20orf141Q9NUB4 165 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 FLRT3Q9NZU0 649 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 FBXL2Q9UKC9 423 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 PROCRQ9UNN8 238 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 MED12Q93074 2177 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 DENND4CQ5VZ89 1909 aa9.14□□□□□ -0.95
SMG6-213ENST00000573166 ITGB2P05107 769 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 POU3F4P49335 361 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 MVDP53602 400 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 ARFRP1Q13795 201 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 TRAM1Q15629 374 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 NTRK2Q16620 822 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 DCDC5Q6ZRR9 648 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 UXS1Q8NBZ7 420 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 OR2M7Q8NG81 312 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 HOXB13Q92826 284 aaPredicted RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 RPL3LQ92901 407 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 ZC3HAV1LQ96H79 300 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 HINT3Q9NQE9 182 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 ING3Q9NXR8 418 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 HRH3Q9Y5N1 445 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 SLC2A10O95528 541 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 PTHP01270 115 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 CDK1P06493 297 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 CRHBPP24387 322 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 MOGQ16653 247 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 OR2G6Q5TZ20 316 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 MRPL14Q6P1L8 145 aaKnown RBP9.13□□□□□ -0.95
SMG6-213ENST00000573166 VHLLQ6RSH7 139 aa9.13□□□□□ -0.95
SMG6-213ENST00000573166 COX15Q7KZN9 410 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms