RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 IGFBP1P08833 259 aaPredicted RBP17.84■□□□□ 0.45
LITAF-205ENST00000570904 PATE4P0C8F1 98 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 NR4A1P22736 598 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 SF3A3Q12874 501 aaKnown RBP eCLIP17.84■□□□□ 0.45
LITAF-205ENST00000570904 NANOGP8Q6NSW7 305 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 OR6X1Q8NH79 312 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 SPATA3Q8NHX4 192 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 TMEM54Q969K7 222 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 MSI2Q96DH6 328 aaKnown RBP17.84■□□□□ 0.45
LITAF-205ENST00000570904 ZNF426Q9BUY5 554 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 PCDHAC1Q9H158 963 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 CHODLQ9H9P2 273 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 NANOGQ9H9S0 305 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 GLTPQ9NZD2 209 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 FBXO9Q9UK97 447 aaPredicted RBP17.84■□□□□ 0.45
LITAF-205ENST00000570904 CMAHPQ9Y471 501 aa17.84■□□□□ 0.45
LITAF-205ENST00000570904 MALRD1Q5VYJ5 2156 aa17.83■□□□□ 0.45
LITAF-205ENST00000570904 LOC100289279A0A1B0GTE1 492 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 FXYD1O00168 92 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 STAMBPO95630 424 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 ADRA2AP08913 450 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 UMPSP11172 480 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 DAOP14920 347 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 TNFRSF1BP20333 461 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 IGFBP5P24593 272 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 RAB1AP62820 205 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 ZP4Q12836 540 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 CYLC2Q14093 348 aaPredicted RBP17.83■□□□□ 0.44
LITAF-205ENST00000570904 METTL21CQ5VZV1 264 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 CCDC80Q76M96 950 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 CARM1Q86X55 608 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 FGFBP3Q8TAT2 258 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 MPP4Q96JB8 637 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 PRSS27Q9BQR3 290 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 MRPL37Q9BZE1 423 aaKnown RBP17.83■□□□□ 0.44
LITAF-205ENST00000570904 SHARPINQ9H0F6 387 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 TPK1Q9H3S4 243 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 ZNF229Q9UJW7 825 aa17.83■□□□□ 0.44
LITAF-205ENST00000570904 ERCC1P07992 297 aaPredicted RBP17.82■□□□□ 0.44
LITAF-205ENST00000570904 ASAH2BP0C7U1 165 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 ZNF35P13682 527 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 RAB39AQ14964 217 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 REP15Q6BDI9 236 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 FAM166AQ6J272 317 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 IL17RELQ6ZVW7 336 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 NANOGNBQ7Z5D8 188 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 CALHM3Q86XJ0 350 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 SKA3Q8IX90 412 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 NEU4Q8WWR8 484 aaPredicted RBP17.82■□□□□ 0.44
LITAF-205ENST00000570904 RASSF5Q8WWW0 418 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 ZNF566Q969W8 418 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 MRPL24Q96A35 216 aaKnown RBP17.82■□□□□ 0.44
LITAF-205ENST00000570904 SLC19A3Q9BZV2 496 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 MEPEQ9NQ76 525 aaPredicted RBP17.82■□□□□ 0.44
LITAF-205ENST00000570904 LPAR3Q9UBY5 353 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 KCNS2Q9ULS6 477 aa17.82■□□□□ 0.44
LITAF-205ENST00000570904 LRP5LA4QPB2 252 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 SHOX2O60902 331 aaPredicted RBP17.81■□□□□ 0.44
LITAF-205ENST00000570904 UBL3O95164 117 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 HIST1H2ABP04908 130 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 ZNF23P17027 643 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 LRFN4Q6PJG9 635 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 DEF8Q6ZN54 512 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 HIST3H2AQ7L7L0 130 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 PIWIL3Q7Z3Z3 882 aaKnown RBP17.81■□□□□ 0.44
LITAF-205ENST00000570904 SLC22A24Q8N4F4 322 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 ZNF540Q8NDQ6 660 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 PFN4Q8NHR9 129 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 HIST1H2ACQ93077 130 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 LRRC58Q96CX6 371 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 SLC25A44Q96H78 314 aaPredicted RBP17.81■□□□□ 0.44
LITAF-205ENST00000570904 ECSITQ9BQ95 431 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 SYT3Q9BQG1 590 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 SOX7Q9BT81 388 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 FZR1Q9UM11 496 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 SH3GLB1Q9Y371 365 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 SPEF1Q9Y4P9 236 aa17.81■□□□□ 0.44
LITAF-205ENST00000570904 FBN3Q75N90 2809 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 LYNX1G3V0Z9 82 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 BLOC1S5-TXNDC5H3BN57 136 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 MRASO14807 208 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 PGA4P0DJD7 388 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 PGA3P0DJD8 388 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 LYNX1P0DP58 116 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 TROVE2P10155 538 aaKnown RBP eCLIP17.8■□□□□ 0.44
LITAF-205ENST00000570904 UGT2B15P54855 530 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 KLF10Q13118 480 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 MMEL1Q495T6 779 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 GKAP1Q5VSY0 366 aaPredicted RBP17.8■□□□□ 0.44
LITAF-205ENST00000570904 ZNF584Q8IVC4 421 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 NKAIN4Q8IVV8 208 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 PHC2Q8IXK0 858 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 OR8J3Q8NGG0 315 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 SH3GL3Q99963 347 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 DENND2DQ9H6A0 471 aaPredicted RBP17.8■□□□□ 0.44
LITAF-205ENST00000570904 FGFR1OP2Q9NVK5 253 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 TMEM38BQ9NVV0 291 aa17.8■□□□□ 0.44
LITAF-205ENST00000570904 PHF1O43189 567 aaPredicted RBP17.79■□□□□ 0.44
LITAF-205ENST00000570904 DHHO43323 396 aa17.79■□□□□ 0.44
LITAF-205ENST00000570904 SYNGR3O43761 229 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms