RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 EEF1A1P5Q5VTE0 462 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 LIPNQ5VXI9 398 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PYHIN1Q6K0P9 492 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 RPL22L1Q6P5R6 122 aaKnown RBP7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PRR23CQ6ZRP0 262 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 TMPRSS9Q7Z410 1059 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PM20D2Q8IYS1 436 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 POMGNT2Q8NAT1 580 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF680Q8NEM1 530 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 MARVELD1Q9BSK0 173 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 TBL1XR1Q9BZK7 514 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 MED28Q9H204 178 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 MMP25Q9NPA2 562 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 GMEB2Q9UKD1 530 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 ICAM5Q9UMF0 924 aa7.96□□□□□ -1.14
LINC00558-201ENST00000569422 PMS2P1A4D2B8 440 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 TLCD2A6NGC4 264 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SC5DO75845 299 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 GLCEO94923 617 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 HLA-DQB1P01920 261 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 CD14P08571 375 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 ANKRD34CP0C6C1 535 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 CD27P26842 260 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SLC6A1P30531 599 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF117Q03924 483 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 PLCXD2Q0VAA5 305 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SKP2Q13309 424 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 BIKQ13323 160 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SERTAD2Q14140 314 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 STPG1Q5TH74 334 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 CHRDL2Q6WN34 429 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 FAM220AQ7Z4H9 259 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 ATG4DQ86TL0 474 aaPredicted RBP7.95□□□□□ -1.14
LINC00558-201ENST00000569422 CMTM4Q8IZR5 234 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OR6V1Q8N148 313 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OR51A4Q8NGJ6 313 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OR10AC1Q8NH08 325 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OR1L3Q8NH93 324 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 AKAP1Q92667 903 aaKnown RBP eCLIP7.95□□□□□ -1.14
LINC00558-201ENST00000569422 TRIM63Q969Q1 353 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 ZDHHC12Q96GR4 267 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 LCORQ96JN0 433 aaPredicted RBP7.95□□□□□ -1.14
LINC00558-201ENST00000569422 TMUB1Q9BVT8 246 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 CACNG6Q9BXT2 260 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OR11A1Q9GZK7 315 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SLC2A4RGQ9NR83 387 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 METTL12A8MUP2 240 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OGG1O15527 345 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SLC25A12O75746 678 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 OPN1LWP04000 364 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 GALP22466 123 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 HLA-DMAP28067 261 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 GABRA4P48169 554 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 SNTB2Q13425 540 aaKnown RBP7.95□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF676Q8N7Q3 588 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 HOXB13Q92826 284 aaPredicted RBP7.95□□□□□ -1.14
LINC00558-201ENST00000569422 PPP1R14AQ96A00 147 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 RNF170Q96K19 258 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 GDF15Q99988 308 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 LIN7BQ9HAP6 207 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 TCF7L1Q9HCS4 588 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 LANCL2Q9NS86 450 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 FLVCR2Q9UPI3 526 aa7.95□□□□□ -1.14
LINC00558-201ENST00000569422 MUC3AQ02505 3323 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 FABP7O15540 132 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF217O75362 1048 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SLC43A1O75387 559 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 TOXO94900 526 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 AKR7A3O95154 331 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 DHFRP00374 187 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 HNRNPKP61978 463 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 IGLV3-21P80748 117 aaPredicted RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MELKQ14680 651 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SMAD2Q15796 467 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ETFDHQ16134 617 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 LINC01590Q5TEZ4 76 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 LRRN1Q6UXK5 716 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 STX12Q86Y82 276 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CCDC36Q8IYA8 594 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 DUSP19Q8WTR2 217 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 NSMAFQ92636 917 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ATOH1Q92858 354 aaPredicted RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 YIPF5Q969M3 257 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 KCTD12Q96CX2 325 aaKnown RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 TSPAN32Q96QS1 320 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 DPAGT1Q9H3H5 408 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CTSFQ9UBX1 484 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 KLK11Q9UBX7 282 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ATXN7L1Q9ULK2 861 aaPredicted RBP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 ZNF879B4DU55 563 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 NDUFA2O43678 99 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 TCRBP04435 133 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 PNMTP11086 282 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 PPICP45877 212 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MAB21L1Q13394 359 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 MEP1BQ16820 701 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00558-201ENST00000569422 SLC36A2Q495M3 483 aa7.94□□□□□ -1.14
LINC00558-201ENST00000569422 C14orf28Q4W4Y0 310 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms